DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15279 and slc6a13

DIOPT Version :10

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_073798676.1 Gene:slc6a13 / 100332592 ZFINID:ZDB-GENE-170607-2 Length:622 Species:Danio rerio


Alignment Length:580 Identity:210/580 - (36%)
Similarity:323/580 - (55%) Gaps:37/580 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 EERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVIGQ 112
            ::|..|...:||::|.....:|||||||||:....||||||.|||||.||..|.|:::||:.:||
Zfish    29 KDRGQWSNKLEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPVFFLEISLGQ 93

  Fly   113 FSSRGSVKVF-DLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESFRNPLPWSTCRAEWGI 176
            ::|.|.:..: .:.|..:|:|......|.:|:.||..::|....|...||...||||:|...|..
Zfish    94 YTSEGGITCWRKISPLFEGIGYATQVIVALLNFYYIIVLAWGIFYLSNSFTWNLPWSSCNNTWNT 158

  Fly   177 H-CINSAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFVKEVLHEKPNIEEGIGLPNWEL 240
            . |:...         ..||...|:| :.:....||.    ::.:.||.....||: ||..:|:|
Zfish   159 ESCMEFQ---------RRNDSVDQSY-LDNATSPVIE----FWERRVLRISSGIED-IGTLHWDL 208

  Fly   241 VIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGIYYFIKPQWGKI 305
            |:.|.:||...:|.|.:||||:||..||.|.||||::.:||:|.|||||:..||.:::.|..|::
Zfish   209 VLCLLLAWVLCYFCIWKGVKSTGKVVYFTATFPYVMLVILLIRGVTLPGASRGIQFYLYPDLGRL 273

  Fly   306 LDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLLAGFTIFGILGH 370
            .||:||..|.||.|:|.::|.|.:....|:||:.:|.:||:..:..|::.||.:|||.||.|||.
Zfish   274 ADPQVWMDAGTQIFFSYAICLGCLTALGSYNKYNNNCYRDSLALCFLNSGTSFVAGFAIFSILGF 338

  Fly   371 LAHEIGTDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLFFLMLFVLGIGSNIAMTSCSVTA 435
            :::|... .|..|.:.|.|||||:||.|::.....| :::..||:|:.:||:.|........|||
Zfish   339 MSYEQNV-PISEVAESGPGLAFIAYPRAVSMMPISP-LWACFFFIMIVLLGLDSQFVCVESLVTA 401

  Fly   436 IRDRFPNFGQWQ-----CSLLIAVVSFFIGLMYITPGGQYMLTLVDFFGAS-MIALVLGIAELYT 494
            :.|.:|:|.:.:     ..|::|:|||.:||:.:|.||.|:..|.|::.|| |..|.:.|.|...
Zfish   402 MVDMYPSFFRRKNRRELLILVVAIVSFLVGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFETVC 466

  Fly   495 IGWIYGTDRLCKDIEFMLGRKVGLYWRLCWSIITPLIMTVILIYFYATYQPLTYNN-IVYPNWSY 558
            |.||||.:|...:||.|:|.:.|.|.:.||...||........:....|.||.||| .|||.|.|
Zfish   467 IAWIYGANRFYDNIEDMIGYRPGPYIKYCWLFFTPATCFGTFAFSLIKYTPLKYNNEYVYPWWGY 531

  Fly   559 SIGWLITAFGILQLPIWMIVAIVRDPGQTLGA---KIRGAFTPKKNWGPSDPLLREQYHK 615
            ::||::....::.:|:|:|..:    |.|.|:   :::....|    .|..|..|.:..|
Zfish   532 ALGWMLALSSMICVPLWVIYRM----GTTKGSLMERVQFLIRP----SPDLPKSRREQEK 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:444915 205/559 (37%)
slc6a13XP_073798676.1 None

Return to query results.
Submit another query.