DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15279 and slc6a14.1

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_002939712.3 Gene:slc6a14.1 / 100127180 XenbaseID:XB-GENE-480827 Length:634 Species:Xenopus tropicalis


Alignment Length:592 Identity:229/592 - (38%)
Similarity:332/592 - (56%) Gaps:35/592 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 EERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVIGQ 112
            :||..|.|..::|:|.|..:||||||||||:.|..||||||||||.|:|.|.|.|:::||..:||
 Frog    30 KERGNWSKKSDYLLSMIGYAVGLGNVWRFPYLAYKNGGGAFLIPYTIMLALAGLPLFFLECSMGQ 94

  Fly   113 FSSRGSVKVFDLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESFRNPLPWSTCRAEWGIH 177
            |||.|.|.|:...|.::|||.........:|.||..::|....|...||:..||||.|.|.....
 Frog    95 FSSSGPVLVWRAVPILQGVGITMVLVTTFVSIYYNIIIAYSLYYMFASFQTILPWSDCFAWADEK 159

  Fly   178 CINSAPDASNWSQLESNDQRPQNYT-MKSQN----------DRVITSSEWYFVKEVLHEKPNIEE 231
            |........|.|.  ||:....|.| :|.:|          :.|...|:.|:.|..|.....::|
 Frog   160 CSKVTRGFCNVSL--SNNTVAYNLTWVKERNLTCIENSIVMEDVDLPSKQYWEKVTLRLSGGLDE 222

  Fly   232 GIGLPNWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGIYY 296
             .|...|.|.:.|.:||..|...:.:|:|||||..||.|:|||:::.:||||..||.|:.:||.|
 Frog   223 -TGEIVWYLALCLLLAWIIVGAALFKGIKSSGKVVYFTAIFPYIVLIILLVRGATLEGAFNGIDY 286

  Fly   297 FI--KPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLL 359
            :|  |....|:::.:||..|.||.|:|||..:|.:|..||:|||.:|.:.||.:|...:.:||:.
 Frog   287 YIGTKSNITKLMEAEVWKDAATQIFFSLSTAWGGLIALSSYNKFHNNCYSDAIVVCVTNCLTSVF 351

  Fly   360 AGFTIFGILGHLAHEIGTDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLFFLMLFVLGIGS 424
            |||.||.||||:|. :....:..||..|.|||||:||:|:||....| ::|.|||.||..||:.|
 Frog   352 AGFAIFSILGHMAF-VTDKPVPEVVDSGFGLAFIAYPEALAKLPISP-LWSFLFFFMLLTLGLDS 414

  Fly   425 NIAMTSCSVTAIRDRFPNFGQWQ---CSLLIAVVSFFIGLMYITPGGQYMLTLVDFFGASMIALV 486
            ..||....:|:|:|.||...:..   .::...|:.|.:||:.:|..|.|.:.|:|:|......|.
 Frog   415 QFAMIETIITSIQDAFPQMMKRMRIPVTIGCCVILFLLGLLCVTQSGIYWVNLIDYFCGGWAILF 479

  Fly   487 LGIAELYTIGWIYGTDRLCKDIEFMLGRK---VGLYWRLCWSIITPLIMTVILIYFYATYQPLTY 548
            ..:.||..|.||||.:|..||||.|:|.|   ..::||.||.:::||::|.||::...|:...||
 Frog   480 SAVLELVGINWIYGGNRFIKDIEMMIGEKHWTFWIWWRACWFVVSPLLLTAILLWSLITFHSPTY 544

  Fly   549 NNIVYPNWSYSIGWLITAFGILQLPIWMIVAIVRDPG---QTLGAKIRGAFTPKKNWGPSDPLLR 610
            .::|||.|..:|||.:..|.::.:||..::.|:|..|   ||..|        .:||||:....|
 Frog   545 GSVVYPTWGTAIGWCMICFCLIWIPIVAVLKIIRAKGNVLQTCKA--------AQNWGPALSQHR 601

  Fly   611 EQYHKEI 617
            .:.:|.:
 Frog   602 GERYKHM 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 222/569 (39%)
slc6a14.1XP_002939712.3 SLC6sbd_ATB0 32..628 CDD:271391 228/590 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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