DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4650 and modSP

DIOPT Version :10

Sequence 1:NP_609722.2 Gene:CG4650 / 34859 FlyBaseID:FBgn0032549 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:283 Identity:73/283 - (25%)
Similarity:109/283 - (38%) Gaps:72/283 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 CGLL--------TNGKIANNISSPWMAYLHT----SELLYVCGGTVITEKLVLTAAHC-----TR 75
            ||.|        :.|...||...||...|:.    .:..:.|||:::|..||:|||||     ||
  Fly   358 CGQLATPIKQFSSGGYTINNTVVPWHVGLYVWHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGTR 422

  Fly    76 ----------ASEQLVARIGEFIGTDDANDTMLSEYQVSQTFIHSLY--NTTTSANDIAILGLAT 128
                      .:.:.....||....:...|..|.|       |...|  .|.....|:|:|.|..
  Fly   423 LPYSYDTFRVIAAKFYRNYGETTPEEKRRDVRLIE-------IAPGYKGRTENYYQDLALLTLDE 480

  Fly   129 DIVFSKTIRPICIVWWTIWRK--YIDNIQVLSG--AQWGLPNDR--------NESDAF---RITD 178
            ....|..|||||:.:.:...|  ..|::|   |  |.|.:.|..        ::|::.   .:.|
  Fly   481 PFELSHVIRPICVTFASFAEKESVTDDVQ---GKFAGWNIENKHELQFVPAVSKSNSVCRRNLRD 542

  Fly   179 IRRQPANMCSTLNGTAILSSQFCAGDSDSKLCNVDFSS--PLGAIITFKNIQRYVLIGI---ATT 238
            |  |....|....|.::.    |.|||..     .|:|  |..|..|: |..|:.|.|:   |..
  Fly   543 I--QADKFCIFTQGKSLA----CQGDSGG-----GFTSELPTNAFSTW-NTARHFLFGVISNAPN 595

  Fly   239 NQKCKRA-SVYTDVLSHTDFILS 260
            ..:|..: :|.|::....|.||:
  Fly   596 ADQCAHSLTVMTNIQHFEDMILN 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4650NP_609722.2 Tryp_SPc 33..258 CDD:214473 68/266 (26%)
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 68/266 (26%)
Blue background indicates that the domain is not in the aligned region.

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