DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4650 and CG33465

DIOPT Version :10

Sequence 1:NP_609722.2 Gene:CG4650 / 34859 FlyBaseID:FBgn0032549 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001033950.2 Gene:CG33465 / 3885587 FlyBaseID:FBgn0053465 Length:488 Species:Drosophila melanogaster


Alignment Length:276 Identity:80/276 - (28%)
Similarity:126/276 - (45%) Gaps:35/276 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ALLFLLPVPGSSQYLDGRCGLLTNGKIANNI--------SSPWMAYLHTSELLYVCGGTVITEKL 66
            ||:.|:...|.:|.||.:|   .:.|.:.||        ::||||.::.:. .::|.||::.:..
  Fly     8 ALIGLVLCQGLAQLLDKKC---HDPKTSENINFNHGATETAPWMASIYKNN-QFICDGTLVHKLF 68

  Fly    67 VLTAAHCTRASEQLVARIGEFIGTDDANDTMLSE-YQVSQTFIHSLYNTTTSANDIAILGLATDI 130
            |||||.|.....||....|.:....||:....:| |.|:....||.:......|||.:|.|..::
  Fly    69 VLTAASCISKDSQLYVLFGMYNQYRDASQFFNNEQYGVAVALQHSNFRPNNGVNDIGLLRLYGEV 133

  Fly   131 VFSKTIRPICIVWWTIWRKYIDNI------QVLSGAQWGLPNDRNESDAFRITDIRRQPANMCST 189
            .....||||||:        :|::      :...|..|........|...:...:.::....|..
  Fly   134 THYAHIRPICII--------LDHVVKSAPFERFEGFGWQQQGTEASSQVRQTVYLSQKKPFECHR 190

  Fly   190 LNG--TAILSSQFCAGDSDSKLCNVDFSSPLGAIITF--KNIQRYVLIGIAT-TNQKCKRASVYT 249
             ||  ..|...|||||:.|...|..:..|||.|..|:  |||.  |.:|:.: .::.|...||||
  Fly   191 -NGQLLPINEGQFCAGNRDRSFCRSNSGSPLTADFTYGVKNIT--VQVGLVSYGSELCSPTSVYT 252

  Fly   250 DVLSHTDFILSVWRQY 265
            ||::..|:|.:..|.:
  Fly   253 DVVAFKDWIYNTVRNF 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4650NP_609722.2 Tryp_SPc 33..258 CDD:214473 70/244 (29%)
CG33465NP_001033950.2 Tryp_SPc 46..264 CDD:238113 68/229 (30%)
Tryp_SPc 293..481 CDD:473915
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.