DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4650 and CG30288

DIOPT Version :10

Sequence 1:NP_609722.2 Gene:CG4650 / 34859 FlyBaseID:FBgn0032549 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster


Alignment Length:293 Identity:79/293 - (26%)
Similarity:120/293 - (40%) Gaps:66/293 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 SSQYLDGRCGL---------LTNGKIANNISSPWMAYLHTSELLYVCGGTVITEKLVLTAAHCTR 75
            |.:.|:..||.         :..|:.|...|:|||..:..|... ||||::||.:.||||.||. 
  Fly    23 SGRLLENDCGTTSSNGYRARIDGGRDAGMESNPWMVRVMISGKA-VCGGSLITARFVLTAEHCI- 85

  Fly    76 ASEQLVARIGEFIGTD------DANDTMLS----EYQVSQTFIHSLYNTTTSANDIAILGLATDI 130
            :...:..|:||:   |      |.:|.:.:    ...|.:..:||     ....||.:|.:...:
  Fly    86 SPMYMNVRLGEY---DTRHPIFDCDDFVCTPRAYNVDVDRKIVHS-----NPGYDIGLLRMQRSV 142

  Fly   131 VFSKTIRPICIVWWTIWRKYIDNIQVLSG----------AQWGLPNDRNESDAFRITDIRRQPAN 185
            :||..:||||::..          :.|.|          ..||..:|..|.|..:...:::.|..
  Fly   143 IFSNYVRPICLILG----------KTLGGNPLSILRFNFTGWGTNSDGEEQDRLQTATLQQLPQW 197

  Fly   186 MCSTLNGTAILSSQFCAGDSDSKLCNVDFSSPLGAIITFKNIQRYVLIGIATTNQK-CKRASVYT 249
            .|.. .|..:..|..|||...|..|..|...||.||.||:...|....|:|:...: |....:||
  Fly   198 SCER-PGRPLDISYICAGSYISDSCKGDSGGPLSAIRTFEGQGRVFQFGVASQGLRLCSGLGIYT 261

  Fly   250 DVLSHTDFILSVWRQYRNGEKSPKTWDLQNNFD 282
            :|...||:||.|               :||:.|
  Fly   262 NVTHFTDWILDV---------------IQNHSD 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4650NP_609722.2 Tryp_SPc 33..258 CDD:214473 69/245 (28%)
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 69/245 (28%)

Return to query results.
Submit another query.