DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4650 and Gzmb

DIOPT Version :10

Sequence 1:NP_609722.2 Gene:CG4650 / 34859 FlyBaseID:FBgn0032549 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:229 Identity:62/229 - (27%)
Similarity:94/229 - (41%) Gaps:42/229 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GLLTNGKIANNISSPWMAYLHTSELL---YVCGGTVITEKLVLTAAHCTRASEQLVARIGEFIGT 90
            |.:..|..|...|.|:||||...:..   ..|||.:|.|..|||||||:.      ::|...:|.
  Rat    19 GEIIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHCSG------SKINVTLGA 77

  Fly    91 DDANDTMLSEYQVSQTFI-------HSLYNTTTSANDIAILGLATDIVFSKTIRPICIVWWTIWR 148
            .:     :.|.:..|..|       |..||:.|.:|||.:|.|.:....|..::|:     .:.|
  Rat    78 HN-----IKEQEKMQQIIPVVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPL-----NLPR 132

  Fly   149 KYIDNIQVLSG-----AQWGLPNDRNE-SDAFRITDIRRQPANMC-STLNGTAILSSQFCAGDSD 206
            :   |::|..|     |.||......: ||..:..::..|....| |.|......:::.|||  |
  Rat   133 R---NVKVKPGDVCYVAGWGKLGPMGKYSDTLQEVELTVQEDQKCESYLKNYFDKANEICAG--D 192

  Fly   207 SKLCNVDFSSPLGAIITFKNIQRYVLIGIATTNQ 240
            .|:....|....|..:..|.    |..||.:..|
  Rat   193 PKIKRASFRGDSGGPLVCKK----VAAGIVSYGQ 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4650NP_609722.2 Tryp_SPc 33..258 CDD:214473 61/225 (27%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 61/227 (27%)

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