DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4650 and F10

DIOPT Version :10

Sequence 1:NP_609722.2 Gene:CG4650 / 34859 FlyBaseID:FBgn0032549 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001229297.1 Gene:F10 / 14058 MGIID:103107 Length:493 Species:Mus musculus


Alignment Length:254 Identity:66/254 - (25%)
Similarity:108/254 - (42%) Gaps:32/254 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLPVPGSSQYLDGRCGLLTNGKIANNISSPWMAYLHTSELLYVCGGTVITEKLVLTAAHCTRASE 78
            |:.:.|..:..||.|              ||.|.|...:....||||::.|..:||||||...:.
Mouse   241 LVRIVGGRECKDGEC--------------PWQALLINEDNEGFCGGTILNEFYILTAAHCLHQAR 291

  Fly    79 QLVARIGEFIGTDDANDTMLSEYQVSQTFIHSLYNTTTSANDIAILGLATDIVFSKTIRPICIVW 143
            :...|:|:.....:..:.|:.|..|  ...|:.:...|...|||:|.|.|.|.|...:.|.|:..
Mouse   292 RFKVRVGDRNTEKEEGNEMVHEVDV--VIKHNKFQRDTYDYDIAVLRLKTPITFRMNVAPACLPQ 354

  Fly   144 --WTIWRKYIDNIQVLSGAQWGLPNDR-NESDAFRITDIRRQPANMCSTLNGTAILSSQFCAGDS 205
              |...........::||  :|..::: .:|:..::.::.....|.|......:|..:.|||| .
Mouse   355 KDWAESTLMTQKTGIVSG--FGRTHEKGRQSNILKMLEVPYVDRNTCKLSTSFSITQNMFCAG-Y 416

  Fly   206 DSKL---CNVDFSSPLGAIITFKNIQRYVLIGIATTNQKCKRA---SVYTDVLSHTDFI 258
            ::||   |..|...|  .:..|||  .|.:.||.:..:.|.|.   .:||.|.:...:|
Mouse   417 EAKLEDACQGDSGGP--HVTRFKN--TYYVTGIVSWGEGCARKGKYGIYTKVTTFLKWI 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4650NP_609722.2 Tryp_SPc 33..258 CDD:214473 60/233 (26%)
F10NP_001229297.1 GLA 36..97 CDD:214503
EGF_CA 98..134 CDD:238011
FXa_inhibition 141..176 CDD:464251
Tryp_SPc 244..473 CDD:238113 65/251 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.