DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4650 and LOC100004411

DIOPT Version :10

Sequence 1:NP_609722.2 Gene:CG4650 / 34859 FlyBaseID:FBgn0032549 Length:299 Species:Drosophila melanogaster
Sequence 2:XP_001343728.5 Gene:LOC100004411 / 100004411 -ID:- Length:494 Species:Danio rerio


Alignment Length:239 Identity:55/239 - (23%)
Similarity:105/239 - (43%) Gaps:23/239 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LTNGKIANNISSPWMAYLHTSELLYVCGGTVITEKLVLTAAHCTRASEQLVARIGEFIGTDDAND 95
            :..|::.....|||...|...:....|||::|.::.|:|||||.:.:...:. ||::.......|
Zfish   249 IVGGQLQRQGGSPWQVLLRREDEYGFCGGSLINQRWVITAAHCLQQTPHHIT-IGDYDKMRPDKD 312

  Fly    96 TMLSEYQVSQTFIHSLYNTTTSANDIAILGLATDIVFSKTIRPICIVWWTIWRKYIDNIQ--VLS 158
            .  .:..|.:...|..|:..|..:|||:|.|::.:.......|.|:....:..:.:...:  ::|
Zfish   313 E--QKITVEKIIPHPHYHEYTFDSDIALLYLSSAVTLGPFASPACLPDANLAERLMKPGEQGLVS 375

  Fly   159 GAQWGLPNDRNESDAFRITDIRRQPANMCSTLNGT--AILSSQFCAG----DSDSKLCNVDFSSP 217
            |  ||..:....|..| :..::.......|.:|.|  .|..:.||||    :.|:  |..|...|
Zfish   376 G--WGSTHYLQRSSRF-LRKVQLPVVEQKSCINSTEQIITDNMFCAGFLMEEMDA--CTGDSGGP 435

  Fly   218 LGAIITFKNIQRYVLIGIATTNQKCK---RASVYTDVLSHTDFI 258
            .  |:.::.  .:.|.|:.:..::|.   :..|||.:.::..:|
Zfish   436 F--IVNYRG--TWFLTGVVSWGERCAAQGKYGVYTRLGNYLSWI 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4650NP_609722.2 Tryp_SPc 33..258 CDD:214473 54/235 (23%)
LOC100004411XP_001343728.5 None

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