Protein Alignment CG4701 and PCH2

DIOPT Version :10

• Sequence 1: NP_609721.1
• Gene: CG4701 / 34858
• FlyBaseID: FBgn0028868
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_009745.2
• Gene: PCH2 / 852484
• SGDID: S000000390
• Length: 564
• Species: Saccharomyces cerevisiae
• Alignment Length: 236
• Identity: 62/236 - (26%)
• Similarity: 96/236 - (40%)
• Gaps: 58/236 - (24%)

  Fly   120 LFSRSKLWRAPKGVLLHGPPGCGKTLIAKAIAKDAGMR-----------------FINLDVGVLT 167
            |.:.:||      :|:|||||.|||.:.||:.:...:|                 .|.|....:.
Yeast   303 LITNNKL------LLVHGPPGTGKTTLCKALCQKLSVRREFSDGSDTIDTNYKGIIIELSCARIF 361

  Fly   168 DKWYGESQKLATAVFTLAKKLQP---------CIIFIDEIESFLRMRG--SNDHEATAMIK--TQ 219
            .||:|||.|..:.||...::|..         |:: |||:|:....|.  |:.:|:|..|:  ..
Yeast   362 SKWFGESSKNISIVFKDIEELLKVNEGRGIFICLL-IDEVEAIASSRTNLSSRNESTDGIRVVNT 425

  Fly   220 FMLQWDGLMSNTNICVLVLGATNRPQDLDKAILRRMPAQFHIGVP---------RDCQRREILQL 275
            .:.|.|.|....|.  |.|..:|....||.|.:.|....|::|.|         :.|....|...
Yeast   426 LLTQLDRLKKYHNF--LALATSNLLDSLDDAFVDRADGVFYVGNPTAEGILHILKVCIEEMITSG 488

  Fly   276 ILQTEQLSPSVN--------LKELA--RLTIGFSGSDLREL 306
            |:.....|..|.        |:::|  ..|:..||..:|:|
Yeast   489 IILFHARSTGVKFFNKYQDILRKIAIKCSTVDISGRTIRKL 529

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4701	NP_609721.1	CDC48	<21..368	CDD:273521	62/236 (26%)
		RecA-like_ATAD1	96..261	CDD:410928	48/170 (28%)
PCH2	NP_009745.2	P-loop containing Nucleoside Triphosphate Hydrolases	248..465	CDD:476819	48/170 (28%)