Protein Alignment CG4701 and AT1G50140

DIOPT Version :10

• Sequence 1: NP_609721.1
• Gene: CG4701 / 34858
• FlyBaseID: FBgn0028868
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_175433.2
• Gene: AT1G50140 / 841436
• AraportID: AT1G50140
• Length: 1003
• Species: Arabidopsis thaliana
• Alignment Length: 271
• Identity: 114/271 - (42%)
• Similarity: 177/271 - (65%)
• Gaps: 1/271 - (0%)

  Fly    53 QLRKLNSSAIGAAKKFRARDFNEHEMMIASHLVTPEDIDISWSDIAGLDGTIQELRETVVLPVRH 117
            :||||..:::..::..:....:|:|....|.:|.|.:|.:.:.||..|:...:.|.|.|:||:|.
plant   672 RLRKLEDNSLKPSQNLKNIAKDEYERNFVSAVVAPGEIGVKFEDIGALEDVKKALNELVILPMRR 736

  Fly   118 RKLFSRSKLWRAPKGVLLHGPPGCGKTLIAKAIAKDAGMRFINLDVGVLTDKWYGESQKLATAVF 182
            .:||:|..|.|..||:||.||||.||||:|||:|.:||..||::....||.||:|:::||..|:|
plant   737 PELFARGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALF 801

  Fly   183 TLAKKLQPCIIFIDEIESFLRMR-GSNDHEATAMIKTQFMLQWDGLMSNTNICVLVLGATNRPQD 246
            :.|.||.|.|||:|||:|.|..| ||::||||..::.:||..||||.|..:..:|:|||||||.|
plant   802 SFATKLAPVIIFVDEIDSLLGARGGSSEHEATRRMRNEFMAAWDGLRSKDSQRILILGATNRPFD 866

  Fly   247 LDKAILRRMPAQFHIGVPRDCQRREILQLILQTEQLSPSVNLKELARLTIGFSGSDLRELCRHAS 311
            ||.|::||:|.:.::.:|....|.:||::.|..|.|......::||:.|.|:|||||:.||..|:
plant   867 LDDAVIRRLPRRIYVDLPDAENRLKILKIFLTPENLESDFQFEKLAKETEGYSGSDLKNLCIAAA 931

  Fly   312 MYRMRQFMREK 322
            ...:::.::|:
plant   932 YRPVQELLQEE 942

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4701	NP_609721.1	CDC48	<21..368	CDD:273521	114/271 (42%)
		RecA-like_ATAD1	96..261	CDD:410928	84/165 (51%)
AT1G50140	NP_175433.2	McrB	546..>770	CDD:441011	39/97 (40%)
		P-loop containing Nucleoside Triphosphate Hydrolases	715..881	CDD:476819	84/165 (51%)
		AAA_lid_3	905..941	CDD:465537	12/35 (34%)