Protein Alignment CG4701 and AT1G02890

DIOPT Version :10

• Sequence 1: NP_609721.1
• Gene: CG4701 / 34858
• FlyBaseID: FBgn0028868
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_171788.3
• Gene: AT1G02890 / 839507
• AraportID: AT1G02890
• Length: 1246
• Species: Arabidopsis thaliana
• Alignment Length: 300
• Identity: 115/300 - (38%)
• Similarity: 185/300 - (61%)
• Gaps: 11/300 - (3%)

  Fly    32 MINALDP---NNKIRGKAKYVAE-----EQLRKLNSSAIGAAKKFRARDFNEHEMMIASHLVTPE 88
            ::|..:|   :||:...|:.:..     .:::..|.|...:.|.....  ||.|..:.|.::.|.
plant   875 LMNCSEPTVKDNKLIISAESITYGLQLLHEIQNENKSTKKSLKDVVTE--NEFEKKLLSDVIPPS 937

  Fly    89 DIDISWSDIAGLDGTIQELRETVVLPVRHRKLFSRSKLWRAPKGVLLHGPPGCGKTLIAKAIAKD 153
            ||.:|:|||..|:.....|:|.|:||::..:||.:.:|.:..||:||.||||.|||::|||:|.:
plant   938 DIGVSFSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATE 1002

  Fly   154 AGMRFINLDVGVLTDKWYGESQKLATAVFTLAKKLQPCIIFIDEIESFL-RMRGSNDHEATAMIK 217
            ||..|||:.:..:|.||:||.:|...|||:||.|:.|.:||:||::|.| |.....:|||...:|
plant  1003 AGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMK 1067

  Fly   218 TQFMLQWDGLMSNTNICVLVLGATNRPQDLDKAILRRMPAQFHIGVPRDCQRREILQLILQTEQL 282
            .:||:.||||.:.....||||.|||||.|||:|::||:|.:..:.:|....|.:||.:||..|::
plant  1068 NEFMINWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDSANRSKILSVILAKEEM 1132

  Fly   283 SPSVNLKELARLTIGFSGSDLRELCRHASMYRMRQFMREK 322
            :..|:|:.:|.:|.|:|||||:.||..|:...:|:.:.::
plant  1133 AEDVDLEAIANMTDGYSGSDLKNLCVTAAHLPIREILEKE 1172

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4701	NP_609721.1	CDC48	<21..368	CDD:273521	115/299 (38%)
		RecA-like_ATAD1	96..261	CDD:410928	77/165 (47%)
AT1G02890	NP_171788.3	FHA	124..223	CDD:469597
		RecA-like_ATAD1	945..1111	CDD:410928	77/165 (47%)
		AAA_lid_3	1135..1175	CDD:465537	14/37 (38%)