Protein Alignment CG4701 and AT4G27680

DIOPT Version :10

• Sequence 1: NP_609721.1
• Gene: CG4701 / 34858
• FlyBaseID: FBgn0028868
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_194498.1
• Gene: AT4G27680 / 828882
• AraportID: AT4G27680
• Length: 398
• Species: Arabidopsis thaliana
• Alignment Length: 317
• Identity: 137/317 - (43%)
• Similarity: 198/317 - (62%)
• Gaps: 12/317 - (3%)

  Fly     3 SQEGTQCQILAIVIRVCVFSALTYYTAKWMINALDPNNKIRGKAKYVAEEQLRKLNSSAIGAAKK 67
            |.|....|.|.:......||.|..:..   :..||||.:...||....:|..::|....:
plant     4 SSETKILQELILYAASAAFSCLVLFAG---LRHLDPNREASKKALEHKKEISKRLGRPLV----- 60

  Fly    68 FRARDFNEHEMMIASHLVTPEDIDISWSDIAGLDGTIQELRETVVLPVRHRKLFSRSKLWRAPKG 132
                ..|.:|.:||..::.|:.||:.:..|.||:...|.|.|.|:||::..:||:..||....||
plant    61 ----QTNPYEDVIACDVINPDHIDVEFGSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQKG 121

  Fly   133 VLLHGPPGCGKTLIAKAIAKDAGMRFINLDVGVLTDKWYGESQKLATAVFTLAKKLQPCIIFIDE 197
            |||:||||.|||::||||||::|..|||:.|..|..||:|::|||.:|||:||.||||.||||||
plant   122 VLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVSAVFSLAYKLQPAIIFIDE 186

  Fly   198 IESFLRMRGSNDHEATAMIKTQFMLQWDGLMSNTNICVLVLGATNRPQDLDKAILRRMPAQFHIG 262
            :||||..|.|.||||.|.:||:||..|||..::.:..|:||.|||||.:||:|||||:|..|.||
plant   187 VESFLGQRRSTDHEAMANMKTEFMALWDGFSTDPHARVMVLAATNRPSELDEAILRRLPQAFEIG 251

  Fly   263 VPRDCQRREILQLILQTEQLSPSVNLKELARLTIGFSGSDLRELCRHASMYRMRQFM 319
            :|...:|.|||::.|:.|::.|.::...:|||..|::|||:.|||:.|:.:.:|:.:
plant   252 IPDRRERAEILKVTLKGERVEPDIDFDHIARLCEGYTGSDIFELCKKAAYFPIREIL 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4701	NP_609721.1	CDC48	<21..368	CDD:273521	133/299 (44%)
		RecA-like_ATAD1	96..261	CDD:410928	93/164 (57%)
AT4G27680	NP_194498.1	RecA-like_ATAD1	85..250	CDD:410928	93/164 (57%)
		AAA_lid_3	274..310	CDD:465537	12/35 (34%)