Protein Alignment CG4701 and AT3G27120

DIOPT Version :10

• Sequence 1: NP_609721.1
• Gene: CG4701 / 34858
• FlyBaseID: FBgn0028868
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_001319654.1
• Gene: AT3G27120 / 822331
• AraportID: AT3G27120
• Length: 680
• Species: Arabidopsis thaliana
• Alignment Length: 306
• Identity: 112/306 - (36%)
• Similarity: 173/306 - (56%)
• Gaps: 36/306 - (11%)

  Fly    52 EQLRKLNSSAIGAAKKFRARDFNEHEMMIASHLVTPEDIDISWSDIAGLDGTIQELRETVVLPVR 116
            |:||.|....|            ||    .|:.:...|.::.|.|||||:...:.:.|.|:.|:.
plant   376 EKLRNLEPRLI------------EH----VSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLL 424

  Fly   117 HRKLFSRSKLWRAP-KGVLLHGPPGCGKTLIAKAIAKDAGMRFINLDVGVLTDKWYGESQKLATA 180
            ...:|   |..|:| ||:||.||||.|||:|.||||.:|...|..:....||.||.||.:||..|
plant   425 RPDIF---KGCRSPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRA 486

  Fly   181 VFTLAKKLQPCIIFIDEIESFLRMRGSN-DHEATAMIKTQFMLQWDGLMSNTNICVLVLGATNRP 244
            :|.:|...||.:||:|||:|.|..|.|: :||::..:||||:::.:|..|.:. .:|::||||||
plant   487 LFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSE-QILLIGATNRP 550

  Fly   245 QDLDKAILRRMPAQFHIGVPRDCQRREILQLILQTEQL----SPSVNLKELARLTIGFSGSDLRE 305
            |:||:|..||:..:.:|.:|....|..|:|.:|:.:.|    ...:|:  :..||.|:||||::.
plant   551 QELDEAARRRLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDDDMNI--ICNLTEGYSGSDMKN 613

  Fly   306 LCRHASMYRMRQFMREKLNTGEEIGKDKIE----WDFEVKDQALQE 347
            |.:.|:|..:|:.::..::. ..:.||.:.    .||  || ||||
plant   614 LVKDATMGPLREALKRGIDI-TNLTKDDMRLVTLQDF--KD-ALQE 655

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4701	NP_609721.1	CDC48	<21..368	CDD:273521	112/306 (37%)
		RecA-like_ATAD1	96..261	CDD:410928	73/166 (44%)
AT3G27120	NP_001319654.1	P-loop containing Nucleoside Triphosphate Hydrolases	382..567	CDD:476819	79/204 (39%)
		AAA_lid_3	593..>628	CDD:465537	12/36 (33%)
		Vps4_C	<644..676	CDD:462762	8/15 (53%)