Protein Alignment CG4701 and afg2b

DIOPT Version :10

• Sequence 1: NP_609721.1
• Gene: CG4701 / 34858
• FlyBaseID: FBgn0028868
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_001070056.2
• Gene: afg2b / 767648
• ZFINID: ZDB-GENE-060929-204
• Length: 748
• Species: Danio rerio
• Alignment Length: 315
• Identity: 90/315 - (28%)
• Similarity: 149/315 - (47%)
• Gaps: 55/315 - (17%)

  Fly    51 EEQLRKLNSSAIGAAKKFRARDFNEHEMMIASHLVTPEDI----------DISWSDIAGLDGTIQ 105
            |..|:.:..|.:||::....    :|.|....| |.|..:          .|.|..|.||:....
Zfish   403 EAALQAMRHSQMGASEPVSM----QHFMQALRH-VQPSCLRSSIGATDFKPIGWEQIGGLEDVKL 462

  Fly   106 ELRETVVLPVRHRKLFSRSKLWRAPKGVLLHGPPGCGKTLIAKAIAKDAGMRFINLDVGVLTDKW 170
            :|::::..|:|..:.|.|..:.| |:||||:|||||.||.:.||.|..:...|.:|....|...:
Zfish   463 KLKQSIEWPMRFPEAFVRLGVSR-PRGVLLYGPPGCAKTTLVKAAASSSHCSFFSLSGAELFSPY 526

  Fly   171 YGESQKLATAVFTLAKKLQPCIIFIDEIESFLRMR---GSNDHEATAMIKTQFMLQWDGL----- 227
            .|:|:|....:|..|:...|.|:|:||::|.:..|   .|:.|...:.:.:..:.:.||:
Zfish   527 VGDSEKTLAQLFAQARACAPSIVFLDEVDSMVGSREDGSSSSHSVQSQVLSVLLTELDGVGVRTL 591

  Fly   228 ------------------------MSNTNIC---VLVLGATNRPQDLDKAILR--RMPAQFHIGV 263
                                    |....:|   ||::.|||||:.||.|:||  |:....:: .
Zfish   592 ERRSTCRKIALLEGGDQEDVRLHQMELQEVCNKDVLIVAATNRPEALDSALLRPGRLDQIIYV-P 655

  Fly   264 PRDCQRR-EILQLILQTEQLSPSVNLKELARLTIGFSGSDLRELCRHASMYRMRQ 317
            |.|.|.| .:|::..::..|...|.|::||..|..|||:||..||:.|::..:|:
Zfish   656 PPDLQARLAVLRICTKSVPLHQDVCLEDLAAQTELFSGADLENLCKEAALLALRE 710

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4701	NP_609721.1	CDC48	<21..368	CDD:273521	90/315 (29%)
		RecA-like_ATAD1	96..261	CDD:410928	58/201 (29%)
afg2b	NP_001070056.2	CDC48	13..740	CDD:273521	90/315 (29%)