DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4701 and Atad1

DIOPT Version :10

Sequence 1:NP_609721.1 Gene:CG4701 / 34858 FlyBaseID:FBgn0028868 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_080763.2 Gene:Atad1 / 67979 MGIID:1915229 Length:361 Species:Mus musculus


Alignment Length:363 Identity:181/363 - (49%)
Similarity:252/363 - (69%) Gaps:27/363 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QILAIVIRVCVFSALTYYTAKWMINALDPNNKIRGKAKYVAEEQLRKLNSSAIGAAKKFRARDFN 74
            :::.::.|:.:|.|:||:|.|||::|:||..|.:.:|:..||:.::::....:         ..:
Mouse    15 EVVGLIFRLTIFGAVTYFTIKWMVDAIDPTRKQKVEAQKQAEKLMKQIGVKNV---------KLS 70

  Fly    75 EHEMMIASHLVTPEDIDISWSDIAGLDGTIQELRETVVLPVRHRKLFSRSKLWRAPKGVLLHGPP 139
            |:||.||:|||.|.::.::||||||||..|.:|::||:||::.:.||..|:|.:.||||||:|||
Mouse    71 EYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGVLLYGPP 135

  Fly   140 GCGKTLIAKAIAKDAGMRFINLDVGVLTDKWYGESQKLATAVFTLAKKLQPCIIFIDEIESFLRM 204
            ||||||||||.||:||.|||||....|||||||||||||.|||:||.||||.|||||||:||||.
Mouse   136 GCGKTLIAKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRN 200

  Fly   205 RGSNDHEATAMIKTQFMLQWDGLMSNTNICVLVLGATNRPQDLDKAILRRMPAQFHIGVPRDCQR 269
            |.|:|||||||:|.|||..||||.::.:..|:|:||||||||||.||:||||.:|||..|...||
Mouse   201 RSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQR 265

  Fly   270 REILQLILQTEQLSPSVNLKELARLTIGFSGSDLRELCRHASMYRMRQFMREKLNTGEEIGKDKI 334
            ..||:|||:.|.:...|:|.|:|:.|.|||||||:|:||.|::..:|:::.   :|.||      
Mouse   266 EAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVN---STSEE------ 321

  Fly   335 EWDFEVKDQALQEWEHLEIQMEDLLKSLSVMKASKHQA 372
                     :..|.|...:|.:||.:::..||.||..|
Mouse   322 ---------SHDEDEIRPVQQQDLHRAIEKMKKSKDAA 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4701NP_609721.1 CDC48 <21..368 CDD:273521 177/346 (51%)
RecA-like_ATAD1 96..261 CDD:410928 113/164 (69%)
Atad1NP_080763.2 SpoVK 4..344 CDD:440232 176/355 (50%)
RecA-like_ATAD1 92..257 CDD:410928 113/164 (69%)

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