DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4701 and zgc:153738

DIOPT Version :10

Sequence 1:NP_609721.1 Gene:CG4701 / 34858 FlyBaseID:FBgn0028868 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_001073437.3 Gene:zgc:153738 / 558115 ZFINID:ZDB-GENE-061013-622 Length:818 Species:Danio rerio


Alignment Length:378 Identity:89/378 - (23%)
Similarity:172/378 - (45%) Gaps:61/378 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LAIVIRVCVFSALTYYTAKWMINALD--PNNKIRGKAKYVAEEQLRKLNSSAIGAAKKFRARDFN 74
            :.:.||..|...:....|.|.: |:|  .:.|::|.||      .:|.:.|   |.:|.:.:|..
Zfish   424 IEVEIRKQVDELMRQELANWKL-AVDKEKSGKVKGAAK------KKKASKS---AKRKKKDKDLT 478

  Fly    75 E--------HEMMIASHLVTPEDI-------DISW-------SDIAGLDGTIQELRETV----VL 113
            .        .|::....|..||::       |.|:       |||..:. ::.::|:.|    :|
Zfish   479 ADRTTESLFEELVEQELLKKPENVKLKDYLGDYSYLGTTLRQSDIEPMP-SLSDVRQVVALYAIL 542

  Fly   114 PVRHRKLFSRSKLWRAPKGVLLHGPPGCGKTLIAKAIAKDAGMRFINLDVGVLTDKWYGES--QK 176
            |:..:.:..:|.|   .|.:||.||.|.||.::..||.::.|....:|....:..|:.|.:  |.
Zfish   543 PLGSQAVHEKSPL---VKTILLVGPSGVGKKMLVHAICQETGANLFDLSPLNVAKKYPGRNGLQM 604

  Fly   177 LATAVFTLAKKLQPCIIFIDEIES-FLRMRGSNDHEA-TAMIKTQFMLQWDGLMSNTNICVLVLG 239
            :...||.:|:.:||.:|:|.:.|. |.|.....:.|. ...:|.........:....  |||::|
Zfish   605 MLHLVFKVARLMQPSVIWIGDAEKMFYRKVPKEEKELDPKRLKKDLPKILKSIRGED--CVLIVG 667

  Fly   240 ATNRPQDLDKAILRRMPAQFH---IGVPR-DCQRREIL--QLILQT-EQLSPSVNLKELARLTIG 297
            .|:.|...|...|    .:|:   |.:|| |...|.::  :||.:. .:::..::|..||:::.|
Zfish   668 TTSDPHSADLKSL----CKFYNKIILIPRPDYASRYVMWKELIKKNGGEVTGDLDLSSLAKISDG 728

  Fly   298 FSGSDLRELCRH-ASMYRMRQFMREKLNTGEEIGK-DKIEWDFEVKDQALQEW 348
            ::...:.::.|. .:..|::||.:..|...|.:.. .:|:..|:.:::||:.|
Zfish   729 YTQGHMVQVVRSILTERRIQQFPKRPLTASEFVSPLARIDPVFQEEEEALKNW 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4701NP_609721.1 CDC48 <21..368 CDD:273521 86/369 (23%)
RecA-like_ATAD1 96..261 CDD:410928 44/175 (25%)
zgc:153738NP_001073437.3 IQ 207..223 CDD:197470
RecA-like_IQCA1 531..690 CDD:410914 43/167 (26%)
Blue background indicates that the domain is not in the aligned region.

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