Protein Alignment CG4701 and Fign

DIOPT Version :10

• Sequence 1: NP_609721.1
• Gene: CG4701 / 34858
• FlyBaseID: FBgn0028868
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_608763.2
• Gene: Fign / 33544
• FlyBaseID: FBgn0031519
• Length: 523
• Species: Drosophila melanogaster
• Alignment Length: 311
• Identity: 110/311 - (35%)
• Similarity: 176/311 - (56%)
• Gaps: 26/311 - (8%)

  Fly    59 SSAIGAAKKFRARDFNEHEMMIASHLVTPEDIDISWSDIAGLDGTIQELRETVVLPVRHRKLFSR 123
            ||:|..|.........:|.:..:.|...|    ::|.|||||:.......|.:::|:|...||:.
  Fly   218 SSSIPPALAHLDSKMVDHILGESMHDFKP----VAWEDIAGLESAKSTFLEAIIMPLRRPDLFTG 278

  Fly   124 SKLWRAPKGVLLHGPPGCGKTLIAKAIAKDAGMRFINLDVGVLTDKWYGESQKLATAVFTLAKKL 188
            .:.  .|:||||.||||.|||||||:||..|..:|.:::...||.||.|:::||...:|.:|...
  Fly   279 VRC--PPRGVLLFGPPGTGKTLIAKSIASQAKAKFFSINPSSLTSKWVGDAEKLVKTLFAVAAAH 341

  Fly   189 QPCIIFIDEIESFLRMRGSNDHEATAMIKTQFMLQWDGLMSNTNICVLVLGATNRPQDLDKAILR 253
            ||.||||||::|.|..|.:|::|:|..:|.:|::..||..||..|.|||:|||||||:||:|:.|
  Fly   342 QPAIIFIDEVDSLLSKRSANENESTLRLKNEFLIHLDGAASNEEIRVLVIGATNRPQELDEAVRR 406

  Fly   254 RMPAQFHIGVP-RDCQRREILQLILQTEQLSPSVNLKELARLTIGFSGSDLRELCRHASMYRMRQ 317
            |...:.::.:| |:.:::.|.:||.|.:.......:.|||.||.|:||:|:..|||:|||..:|.
  Fly   407 RFVRRLYVPLPTREARQKIIEKLIHQVKHNLDVRQVIELAELTDGYSGADVDTLCRYASMAPLRS 471

  Fly   318 FMREKLNTGEEIGKDKIEWDFEVKDQALQEWEHLEIQMEDLLKSLSVMKAS 368
            ...:::                   :.::..:...:.|:|..::|.|:..|
  Fly   472 LTPDQM-------------------EVIETHQLPAVTMDDFKQALRVISKS 503

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4701	NP_609721.1	CDC48	<21..368	CDD:273521	109/309 (35%)
		RecA-like_ATAD1	96..261	CDD:410928	75/164 (46%)
Fign	NP_608763.2	PH-like	<4..50	CDD:473070
		P-loop containing Nucleoside Triphosphate Hydrolases	229..414	CDD:476819	79/190 (42%)
		AAA_lid_3	444..495	CDD:465537	18/69 (26%)
		Vps4_C	<480..520	CDD:462762	5/24 (21%)