Protein Alignment CG4701 and Vps4

DIOPT Version :10

• Sequence 1: NP_609721.1
• Gene: CG4701 / 34858
• FlyBaseID: FBgn0028868
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_573258.1
• Gene: Vps4 / 32777
• FlyBaseID: FBgn0283469
• Length: 442
• Species: Drosophila melanogaster
• Alignment Length: 408
• Identity: 129/408 - (31%)
• Similarity: 200/408 - (49%)
• Gaps: 72/408 - (17%)

  Fly    27 YTAKWMINALDPNNKIRGKA-KYV-----AEEQLRKLNSSAIGAAKKFRARDFNE---------- 75
            :|.|:........:.||.|. :|:     .:|.|:|.....|....:..|:|..:
  Fly    42 HTIKYEAQGEKAKDSIRAKCLQYLDRAEKLKEYLKKGKKKPIKEGGESSAKDDKDKKSDSDDEDG 106

  Fly    76 ---HEMMIASHL---VTPEDIDISWSDIAGLDGTIQELRETVVLPVRHRKLFSRSKL-WRAPKGV 133
               .:..:.|.|   :..|...:.|||:||||...:.|:|.|:||::..:||:..:: |   ||:
  Fly   107 DDPEKKKLQSKLEDAIVIEKPKVQWSDVAGLDAAKEALKEAVILPIKFPQLFTGKRIPW---KGI 168

  Fly   134 LLHGPPGCGKTLIAKAIAKDAG-MRFINLDVGVLTDKWYGESQKLATAVFTLAKKLQPCIIFIDE 197
            ||.||||.||:.:|||:|.:|. ..|.::....|..||.|||:||...:|.||::.:|.||||||
  Fly   169 LLFGPPGTGKSYLAKAVATEANRSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDE 233

  Fly   198 IESFLRMRGSNDHEATAMIKTQFMLQWDGLMSNTNICVLVLGATNRPQDLDKAILRRMPAQFHIG 262
            |:|....|..|::::...|||:|::|..|:.::|: .:|||||||.|..||.||.||...:.:|.
  Fly   234 IDSMCSARSDNENDSVRRIKTEFLVQMQGVGNDTD-GILVLGATNIPWVLDSAIRRRFEKRIYIP 297

  Fly   263 VPRDCQRREILQLIL-QTEQLSPSVNLKELARLTIGFSGSDLRELCRHASMYRMRQFMREKLNTG 326
            :|....|..:.::.| .|..:....:|||||..|.|:||:|:..:.|.|.|..:|     |:.|.
  Fly   298 LPEAHARLVMFKIHLGNTTHVLTEQDLKELAGKTEGYSGADISIVVRDALMEPVR-----KVQTA 357

  Fly   327 --------------EEIGKD-------------KIEWDFEVKDQALQEWEHLEIQMEDLLKSLSV 364
                          |||..|             ::.| .:|....|.|   ..:.|.|:|||||
  Fly   358 THFKRVSGPSPTNHEEIVNDLLVPCSPGDQGAVEMNW-MDVPSDKLFE---PPVTMRDMLKSLS- 417

  Fly   365 MKASKHQAQGTFLEKDLE 382
                  :.:.|..|.||:
  Fly   418 ------RTKPTVNEDDLK 429

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4701	NP_609721.1	CDC48	<21..368	CDD:273521	125/392 (32%)
		RecA-like_ATAD1	96..261	CDD:410928	72/166 (43%)
Vps4	NP_573258.1	MIT_VPS4	6..69	CDD:239141	6/26 (23%)
		RecA-like_VPS4	126..296	CDD:410929	74/173 (43%)
		AAA_lid_3	323..361	CDD:465537	16/42 (38%)
		Vps4_C	379..439	CDD:462762	15/62 (24%)