DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4701 and Katna1

DIOPT Version :10

Sequence 1:NP_609721.1 Gene:CG4701 / 34858 FlyBaseID:FBgn0028868 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_035965.3 Gene:Katna1 / 23924 MGIID:1344353 Length:491 Species:Mus musculus


Alignment Length:343 Identity:118/343 - (34%)
Similarity:181/343 - (52%) Gaps:35/343 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RGKAKYVAE--------EQLRKLNSSAI-GAAKKFRARDFNEHEMMIASHLVTPEDIDISWSDIA 98
            ||||....|        |:..||.::.. ..|.||....:::..:......:..::.::.|.|||
Mouse   148 RGKAVRSREKKEQSKGREEKNKLPAAVTEPEANKFDGTGYDKDLVEALERDIISQNPNVRWYDIA 212

  Fly    99 GLDGTIQELRETVVLPVRHRKLFSRSKLWRAP-KGVLLHGPPGCGKTLIAKAIAKDAGMRFINLD 162
            .|....:.|:|.||||:...:.|   |..|.| ||||:.||||.||||:|||:|.:....|.|:.
Mouse   213 DLVEAKKLLQEAVVLPMWMPEFF---KGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVS 274

  Fly   163 VGVLTDKWYGESQKLATAVFTLAKKLQPCIIFIDEIESFLRMRG-SNDHEATAMIKTQFMLQWDG 226
            ...||.|:.|||:||...:|.:|:...|..||||||:|....|| |.:|||:..:|.:.::|.||
Mouse   275 SSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRMKAELLVQMDG 339

  Fly   227 L-----MSNTNICVLVLGATNRPQDLDKAILRRMPAQFHIGVPRDCQRREILQLILQTEQLSPSV 286
            :     ..:.:..|:||.|||.|.|:|:|:.||:..:.:|.:|....|.|:|::.|:..:|:..|
Mouse   340 VGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDV 404

  Fly   287 NLKELARLTIGFSGSDLRELCRHASMYRMRQFMREKLNTGEEIGKDKIEWDFEVKDQALQEWEHL 351
            ||..:|....|:||:|:..:||.||:..||:  |.:..|.|||            ....:|..|:
Mouse   405 NLASIAENMEGYSGADITNVCRDASLMAMRR--RIEGLTPEEI------------RNLSREAMHM 455

  Fly   352 EIQMEDLLKSLSVMKASK 369
            ...|||.  .:::.|.||
Mouse   456 PTTMEDF--EMALKKISK 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4701NP_609721.1 CDC48 <21..368 CDD:273521 116/340 (34%)
RecA-like_ATAD1 96..261 CDD:410928 72/171 (42%)
Katna1NP_035965.3 Interaction with microtubules, sufficient for microtubule severing activity. /evidence=ECO:0000269|PubMed:28436967 1..185 11/36 (31%)
Interaction with dynein and NDEL1. /evidence=ECO:0000250 1..75
Interaction with KATNB1 1..29
Kp60-NTD 4..72 CDD:439297
SpoVK 61..469 CDD:440232 115/339 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..182 9/33 (27%)
RecA-like_KTNA1 210..379 CDD:410930 72/171 (42%)
Vps4_C <456..489 CDD:462762 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

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