Protein Alignment CG4701 and Pex6

DIOPT Version :10

• Sequence 1: NP_609721.1
• Gene: CG4701 / 34858
• FlyBaseID: FBgn0028868
• Length: 384
• Species: Drosophila melanogaster
• Sequence 2: NP_663463.1
• Gene: Pex6 / 224824
• MGIID: 2385054
• Length: 981
• Species: Mus musculus
• Alignment Length: 331
• Identity: 104/331 - (31%)
• Similarity: 163/331 - (49%)
• Gaps: 63/331 - (19%)

  Fly    50 AEEQLRKLNSSAIGAAKKFRARDFNEHEMMIASHLVTPEDIDISWSDIAGLDGTIQELRETVVLP 114
            |.:||:..:|.|:||                      |....:||.|:.||....:|:.||:.||
Mouse   683 ALDQLQTAHSQAVGA----------------------PRIPSVSWHDVGGLQDVKKEILETIQLP 725

  Fly   115 VRHRKLFSRSKLWRAPKGVLLHGPPGCGKTLIAKAIAKDAGMRFINLDVGVLTDKWYGESQKLAT 179
            :.|.:|.|   |.....|:|||||||.||||:|||:|.:..:.|:::....|.:.:.|:|::...
Mouse   726 LEHPELLS---LGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVR 787

  Fly   180 AVFTLAKKLQPCIIFIDEIESFLRMRGSNDHEATAM--IKTQFMLQWDGLMSNTNICVLVLGATN 242
            .||..|:...|||||.||::|....||.:......|  :.:|.:.:.|||.|..:  |.|:||||
Mouse   788 EVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQD--VFVIGATN 850

  Fly   243 RPQDLDKAILRRMPAQF----HIGVPRD-CQRREILQLILQTEQLSPSVNLKEL-----ARLTIG 297
            ||..||.|:||  |.:|    .:|...| ..:..:|..|.:..:|..||:|..:     .:||
Mouse   851 RPDLLDPALLR--PGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLT-- 911

  Fly   298 FSGSDLRELCRHASMYRMRQFMREKLNTGEEIGKDKIEWDFEVKDQALQEWEHLEIQMEDLLKSL 362
              |:||..||..|.|..:::.:|:            :|...|::..||.      :.|||||::.
Mouse   912 --GADLYSLCSDAMMTALKRRVRD------------LEEGLELRSSALL------LTMEDLLQAA 956

  Fly   363 SVMKAS 368
            :.::.|
Mouse   957 ARLQPS 962

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4701	NP_609721.1	CDC48	<21..368	CDD:273521	103/329 (31%)
		RecA-like_ATAD1	96..261	CDD:410928	66/170 (39%)
Pex6	NP_663463.1	CDC48	<467..978	CDD:273521	104/331 (31%)