Protein Alignment CSN1a and csn1

DIOPT Version :9

• Sequence 1: NP_609720.1
• Gene: CSN1a / 34857
• FlyBaseID: FBgn0028838
• Length: 364
• Species: Drosophila melanogaster
• Sequence 2: NP_596680.1
• Gene: csn1 / 2540352
• PomBaseID: SPBC215.03c
• Length: 422
• Species: Schizosaccharomyces pombe
• Alignment Length: 347
• Identity: 90/347 - (25%)
• Similarity: 147/347 - (42%)
• Gaps: 45/347 - (12%)

  Fly     3 NGEETMLHLPSYADRYTDIPRLIRLKFIAQVCPELSVLALELALNHVK-TTYNVKLYDELYKTL- 65
            |.||    |..|.|.|....::.|..|:|:....|....:..|:..:| .|||::||..|::..
pombe     8 NQEE----LKRYLDEYGVWSKIFRALFVARNSKPLRSFCVHYAIKELKEKTYNLELYQSLFEEFQ 68

  Fly    66 -CVEVDRKYPNQSKGNEELHTTGGSEPSTSSGRGRVVVPYDSYWVEDNIMEATLMLQELDAELNF 129
             |.|           ||:|                     |..|||.........|::|..||..
pombe    69 DCFE-----------NEQL---------------------DVEWVESVTFHRKQNLEQLRRELKA 101

  Fly   130 KKSNSGSSYVRRILEEIGDHHEKSGNLQMAVKFYARARPYCTSSENVINMFRNLIRVSIYMENWW 194
            .|:|.....:|....::.......|....|::.||:.|.|||::..:.::...|:|:||::.|:.
pombe   102 YKNNLIRESIRAAQLDLASFFADVGQFDSALRSYAKVREYCTNAGQIAHLSLELMRISIWIGNYS 166

  Fly   195 HVLTYIDEAKQYAYGFENLAQEVPARLSCVAGLAHLGLKIYKSAAQYFLSTPYGRYDYDKIVAPE 259
            |||.:...||...    :.|.|:.:.:....|||:..|..|:.|..:||.....  ..|.|:...
pombe   167 HVLAFGSRAKSTV----SAAMELTSPIYAYCGLANFCLGDYEEALAHFLKVETD--TSDGIITKT 225

  Fly   260 DVTLYAGLCALATFDRETLQLNAINSEAFKPFFQLSPKMWTILAKFYAGEFDACMTLLREIENHV 324
            |:::|..|||||.:|.:.|......:|.|.....|.|.:...|......::...:..|::.....
pombe   226 DISVYISLCALACWDHKRLIQELERNEEFNALSDLDPSLRRCLQAKCNRKYSLLLDTLQQNAQDY 290

  Fly   325 RLDVYLSPHVSALYDLIMARML 346
            .||:||:|.::.|:.||..|.|
pombe   291 SLDMYLAPQLTNLFSLIRERSL 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CSN1a	NP_609720.1	RPN7	105..281	CDD:287560	50/175 (29%)
csn1	NP_596680.1	RPN7	77..246	CDD:287560	50/174 (29%)
		PCI	262..365	CDD:279707	13/51 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	105	1.000	Domainoid score	I1702
eggNOG	1	0.900	-	-		E1_KOG0686
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	160	1.000	Inparanoid score	I1244
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0005242
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR14145
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	8	7.920