Protein Alignment CSN1a and csn-1

DIOPT Version :9

• Sequence 1: NP_609720.1
• Gene: CSN1a / 34857
• FlyBaseID: FBgn0028838
• Length: 364
• Species: Drosophila melanogaster
• Sequence 2: NP_001370106.1
• Gene: csn-1 / 180168
• WormBaseID: WBGene00000813
• Length: 601
• Species: Caenorhabditis elegans
• Alignment Length: 390
• Identity: 88/390 - (22%)
• Similarity: 155/390 - (39%)
• Gaps: 73/390 - (18%)

  Fly     2 DNG-----EETMLHLPSYADRYTDIPRLIRLKFIAQVCPELSVLALELALNHVKT-TYNVKLYDE 60
            |:|     .|:.:.:.|.|..|......:|.:|||:.||.|...|....:|::|. |.::..|..
 Worm    72 DDGYSLTVNESAIDIESLACSYDSNAFFLRARFIARHCPILRADAYISLINYLKEHTTDITHYVA 136

  Fly    61 LYKTLCVEVDRKYPNQSKGNEELHTTGGSEPSTSSGRGRVVVPY-DSYWVEDNIMEATLMLQELD 124
            .:..|..|:.||   :.| |.:|:               ..:|. |..|:|:|.........:|.
 Worm   137 FFNELESELARK---EFK-NRQLN---------------FQIPLRDQKWIEENGATWQSTTDQLQ 182

  Fly   125 AELNFKKSNSGSSYVRRILEEIGDHHEKSGNLQMAVKFYARA-RPYCTSSENVINMFRNLIRVSI 188
            ||....|........||.:|::..|:..:|.:..|::.|:|. |.|||..::.|||:.|.:.|:|
 Worm   183 AEYKRHKDEGVKESTRRAMEDLFQHYMMAGKIDEAIRLYSRGIRDYCTQLKHSINMWINWMEVAI 247

  Fly   189 YMENW----------WHVLTYIDEAKQYAYGFENLAQEVP------------------------- 218
            ...:|          :..|...|:|::.:    ..:|:.|
 Worm   248 CANDWGKLDTVTNTAYRSLKDADDAEKNS----QQSQQAPPQRGENAPYMVERDPNAPIQTLTNR 308

  Fly   219 -----ARLSCVAG--LAHLGLKIYKSAAQYFLSTPYGRYDYDKIVAPEDVTLYAGLCALATFDRE 276
                 |...|:|.  |..|..|.|....:..|............|...|:.:|..|.|:||..|.
 Worm   309 QLIETALAKCLAAQVLLKLRNKRYSQVVETILQIKTECLQSKWFVTSSDLGIYGMLSAMATMSRA 373

  Fly   277 TLQLNAINSEAFKPFFQLSPKMWTILAKFYAGEFDACMTLLREIENHVRLDVYLSPHVSALYDLI 341
            .|:|....:..|:...:..|::..:|..:.:..|..|..::|.::..:.||.::|.:|..|::.|
 Worm   374 DLKLQVSGNGTFRKLLESEPQLIELLGSYTSSRFGRCFEIMRSVKPRLLLDPFISRNVDELFEKI 438

  Fly   342  341
             Worm   439  438

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CSN1a	NP_609720.1	RPN7	105..281	CDD:287560	49/218 (22%)
csn-1	NP_001370106.1	RPN7	163..378	CDD:402301	49/218 (22%)
		PCI	393..495	CDD:396121	11/46 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160167372
Domainoid	1	1.000	83	1.000	Domainoid score	I5337
eggNOG	1	0.900	-	-		E1_KOG0686
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	159	1.000	Inparanoid score	I2885
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D223526at33208
OrthoFinder	1	1.000	-	-		FOG0005242
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR14145
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	10	9.900