DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42685 and Pkd1l2

DIOPT Version :9

Sequence 1:NP_609717.5 Gene:CG42685 / 34854 FlyBaseID:FBgn0261571 Length:1609 Species:Drosophila melanogaster
Sequence 2:XP_036010263.1 Gene:Pkd1l2 / 76645 MGIID:2664668 Length:2466 Species:Mus musculus


Alignment Length:1140 Identity:207/1140 - (18%)
Similarity:353/1140 - (30%) Gaps:351/1140 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   555 TLRLPPYALKENAVYDFSLTVISRFDPRNRMTTTQTIKGVAKTTFTPQILCRRNCALGVYAPLDS 619
            |..|||.    |:.....|.::...:....  |.|.:...|.....|||.|.:||. .|.|..|.
Mouse   627 TFCLPPL----NSAVTLHLAILRGQELEKE--TEQCLYVSAPLNLGPQISCEKNCR-PVKADQDV 684

  Fly   620 IHLISKCDDCPGTVKRYEWWLLDT---ESQP----------------TLESSHKYLILH-----T 660
            :..::..|:.  :|..:.|:|.||   |::|                .|.|:...|:|:     |
Mouse   685 LLTVTVGDET--SVAVFSWYLDDTVPEEAEPLPAACRLRGFWPRSLTLLHSNSSVLLLNSSFLQT 747

  Fly   661 LEPLVQIRLRVWVKGQGWADAFYTLRRNNGPQHGSCTIYPFLGVEG--FTMFEIDCPGFESPFPP 723
            ..|::.||:.. :....:.:..|.:.....|:..:|||.|   .||  .|.|.:.| ...:...|
Mouse   748 WGPVIPIRVTA-LTSHAYGEDTYMISMLPRPEVPACTIDP---EEGSVLTSFTVSC-STPATLGP 807

  Fly   724 ITYRYMVSYGVVASNVPYSRI-VLTLPAAE-------TIMISICDAIDMCVEKRVEVKVLSIDKS 780
            :.|.:.:..|......|...: .:.||..|       .::||:.:......:.:|.|||      
Mouse   808 VEYCFCLPSGFCLHCGPEPALPAVYLPLGEEKDGFVLPVVISVTNRAGDIEQTQVAVKV------ 866

  Fly   781 MLTGQKEVMNYVPNFFKRGHWNRAYIMGIAAITF-------IETSI---DGDE--------FYSY 827
                              ||   :| .|:..:||       |.|::   .|.|        ..|.
Mouse   867 ------------------GH---SY-TGVEDVTFQEMVSERIATALHQESGREQLLLFAKAVSSE 909

  Fly   828 LTGLVASTGS---QMEQITTLSSHMLIRLHPV-----DFRGATVMAEMFSHLGDSFSAIVQEHEW 884
            |...|.|.||   .|:....:...||..|..|     :.:....:||:...:......:....:|
Mouse   910 LNSEVQSPGSGQLGMDIKRKVRELMLRSLSVVTTGLQNMQRVQALAEVLREVTQRAEELTPAAQW 974

  Fly   885 -----LHR--------------EGYYSLTAMHMFFMSI-------LGKKTESHSNAMCSLHNPAC 923
                 |.|              |......|....|.::       |..::|....|..|......
Mouse   975 EASCALQRATEALLVASTKVRPEDQRRQEATRAMFEAVGSVLEASLSHRSEEPMEANSSQAYIVA 1039

  Fly   924 MNLQIIDLEKPFVIKFDPLILVRINSWLMSTWFLYRCIYFLGVIATQRHHPYDDALTIHKSGIAY 988
            ..|::||       .|...:|                   ||.:....     .|:.:..|...|
Mouse  1040 QLLRVID-------HFQSALL-------------------LGTLPGGL-----PAILVTPSISVY 1073

  Fly   989 QINVTEVTENTKDIQVKTIDHIHVIKLSTKLLYELQRRLNHSSILLQIISQQNFHNIYWWYPDPF 1053
            ...:...:.....:.....|.:.....:...|..::.......|.:...||           :||
Mouse  1074 TDRIQPRSWQGSSVHTAAADSVTFTLPAATFLCPMEDSQEPVDIRMMSFSQ-----------NPF 1127

  Fly  1054 PSKTSVLIVHAYSPVQFFRSAKEFQLTNPLVYKTNITHFNDASFNQYMTNNSIQN------STEV 1112
            ||::...:......::...|:     .:|:..|                 |..||      ....
Mouse  1128 PSRSQFDVSGTVGGLRLTSSS-----GHPIPVK-----------------NLSQNIEILLPRISA 1170

  Fly  1113 HIYSVMLNHKAMLAVRIVNCSELMYIKMRLHRWPTLGQIRQHACRITPDMQGKRIWIANSCERSP 1177
            ||...||:..:..|:.:...:....:.::||..|.:                            |
Mouse  1171 HIEPKMLSLASREALSVNVTAGDTALGIQLHWGPGV----------------------------P 1207

  Fly  1178 AYVAI---HKPGEIRYKTEDKDQLSARGRKKGNRTHDGSETPEVRQKADFIDY--DNEDI----- 1232
            ..:::   :.|.|..|..:               ||    .|.|....|...:  ..||:     
Mouse  1208 LILSLGYGYHPNETSYDAQ---------------TH----LPPVAATGDLPTWILHPEDLPFGEG 1253

  Fly  1233 --VEEVLP-----------LNYSILLEIYQCNIWKNRSLDPGWSEDHCTTSFEHSRGSSVQCTCH 1284
              ...|:|           |...|...:..|..|.  .....|.:..|... ..:..|...|.|:
Mouse  1254 VYYLRVVPEADLESSSGRNLTVGITTFLAHCVFWD--ETQETWDDSGCQVG-PRTTPSQTHCLCN 1315

  Fly  1285 TLGALSSRIFPI--------SSQLFV--EHIPVPIFTFNMILMIFFALLFLLLVFKFLLHLNIIS 1339
            .|....|....:        :::||.  |..||.:.|...:.|::..:|              |.
Mouse  1316 HLTFFGSSFLVMPNAIDVRQTAELFATFEDNPVVVTTVGCLCMLYVLVL--------------IW 1366

  Fly  1340 AYLKNPEFRLQCDASVGKSDQSFVSGSEILLVIVTGGQEFAGTTSNVKFYLKSPHRQQTSYQITQ 1404
            |..|:.:.:.:....|.:.:..|.. ...|:.:.||.:..|.|:|.|...|.....:...:.:: 
Mouse  1367 ARRKDIQDQAKVKVVVLEDNDPFAQ-YHYLVTVYTGHRRGAATSSKVTLTLYGSDGESEPHHLS- 1429

  Fly  1405 DPGHPKLLRNST----IKIMVPRGHIYIPTRLALRL--VPNGRYPSWYCRSITVVDLKLKVQQLF 1463
            ||......|...    :..:.|.|.:.     :|||  ..:|..||||...:.|.|..:..:..|
Mouse  1430 DPDAAVFERGGVDVFLLSTLFPLGELQ-----SLRLWHDNSGDRPSWYVSRVLVYDSVVDRKWYF 1489

  Fly  1464 LVESW--IEGG-------------------SHIQFMR-SKYFTYGN--YSRYPKYTWCKRFRS-- 1502
            |..||  ::.|                   ||:.|.: |..|..|:  ||     .:|...||  
Mouse  1490 LCNSWLSVDVGDCVLDKVFPVATEQDRKQFSHLFFTKTSTGFQDGHIWYS-----VFCSATRSSF 1549

  Fly  1503 -RAEQL--YFSWYLINAITG---------PSQSKV 1525
             |.:::  .||..|...:|.         |::.|:
Mouse  1550 TRVQRVSCCFSMLLCTMLTSIMFWGVPKDPAEQKM 1584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42685NP_609717.5 REJ 411..753 CDD:307914 52/231 (23%)
PLAT 1367..1480 CDD:238061 31/140 (22%)
Pkd1l2XP_036010263.1 CLECT 28..154 CDD:214480
Gal_Lectin 170..252 CDD:396628
REJ 493..866 CDD:366875 56/252 (22%)
GPS 1282..1321 CDD:396408 8/41 (20%)
PLAT_polycystin 1392..1511 CDD:238850 28/124 (23%)
PKD_channel 1987..2407 CDD:400395
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11148
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1276906at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.