DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42685 and PKD1

DIOPT Version :10

Sequence 1:NP_609717.5 Gene:CG42685 / 34854 FlyBaseID:FBgn0261571 Length:1609 Species:Drosophila melanogaster
Sequence 2:XP_047290164.1 Gene:PKD1 / 5310 HGNCID:9008 Length:4348 Species:Homo sapiens


Alignment Length:1413 Identity:273/1413 - (19%)
Similarity:418/1413 - (29%) Gaps:534/1413 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 LRKLMRKWGIRSKRIVYNRCYFH----RCTARFYNTKHKYIVAKVSSLNDRRKLLAHVVRFKIKV 372
            |:.|||    ||:|   |....|    .|..  |.|::::.|.:.:|. .|....|.|....:.|
Human  2202 LQVLMR----RSQR---NYLEAHVDLRDCVT--YQTEYRWEVYRTASC-QRPGRPARVALPGVDV 2256

  Fly   373 RKPPNVSCLPALELEFCKNPEKPVYFSPMGH--LEFFASISDACSTVEYDKITWQLCDITENKII 435
            .:|..|  ||.|.|             |:||  ..|..|..|.              .:|::   
Human  2257 SRPRLV--LPRLAL-------------PVGHYCFVFVVSFGDT--------------PLTQS--- 2289

  Fly   436 ARLKNATGLVVKLLPYKVHILNEPDRRKVFLLRGKAVINGVTTVARCYMKYKPPPIEPLIKGNER 500
                                                 |....|||       |..:.|:|:|...
Human  2290 -------------------------------------IQANVTVA-------PERLVPIIEGGSY 2310

  Fly   501 RLVDVRKPIIIDGSSSKDRLKIRESIKSK-QFLWTCISLDDPFNNYCKKYMSK--SPTLRLPPYA 562
            |:....:.:::|||.|.|. .:.:..::. .|.|.|::........|......  |.|:.:|...
Human  2311 RVWSDTRDLVLDGSESYDP-NLEDGDQTPLSFHWACVASTQREAGGCALNFGPRGSSTVTIPRER 2374

  Fly   563 LKENAVYDFSLTVISRFDPRNRMTTTQTI---KGVAKTTFTPQILCRRNCALGVYAPLDS--IHL 622
            |.....|.|||||...  .|....|.||:   .|.........:.|:   |..||....|  ::|
Human  2375 LAAGVEYTFSLTVWKA--GRKEEATNQTVLIRSGRVPIVSLECVSCK---AQAVYEVSRSSYVYL 2434

  Fly   623 ISKCDDCPGTVKRYEW---------WLLDTESQPTLESSHKYLILHTLEPLVQIRLRVWVKGQGW 678
            ..:|.:|....||..|         .:|| |:..:..|:...|:|         |..|...|:|:
Human  2435 EGRCLNCSSGSKRGRWAARTFSNKTLVLD-ETTTSTGSAGMRLVL---------RRGVLRDGEGY 2489

  Fly   679 ADAFYTLRR--------------NNGPQHGSCTIYPFLGVEGF-TMFEIDCPGF---ESPFPPIT 725
            ......|.|              |..|..|||.::|...|... |....:|.|:   |....|:.
Human  2490 TFTLTVLGRSGEEEGCASIRLSPNRPPLGGSCRLFPLGAVHALTTKVHFECTGWHDAEDAGAPLV 2554

  Fly   726 YRYMV-------------------SYGVVASNVPYSRIVLTLPAAETIMISICDAIDMCVEKRVE 771
            |..::                   |||.|            ||........:  .:.:.|:.::.
Human  2555 YALLLRRCRQGHCEEFCVYKGSLSSYGAV------------LPPGFRPHFEV--GLAVVVQDQLG 2605

  Fly   772 VKVLSIDKSMLTGQKEVMNYVPNFFKRGHWNRAYIMGIAAITFIETSIDGDEFYSYLTGLVASTG 836
            ..|:::::|:.....|     ||....|  ...::.|:.|              |.|.||:....
Human  2606 AAVVALNRSLAITLPE-----PNGSATG--LTVWLHGLTA--------------SVLPGLLRQAD 2649

  Fly   837 SQ------MEQITTLSSHMLIRLHPVDFRGATVMAEMFSHLGDSFSAIVQEHEWLHREGYYSLTA 895
            .|      :..:|.|:.:.         |...|.||             .:||..||        
Human  2650 PQHVIEYSLALVTVLNEYE---------RALDVAAE-------------PKHERQHR-------- 2684

  Fly   896 MHMFFMSILGKKTESHSNAMCSLHNPACMNLQIIDLEKPFVIKFDPLILVRINSWLMSTWFLYRC 960
                 ..|....||:                               |:.:|:             
Human  2685 -----AQIRKNITET-------------------------------LVSLRV------------- 2700

  Fly   961 IYFLGVIATQRHHPYDD------AL------------------TIHKSGIAYQINVTEVTENT-- 999
                        |..||      ||                  |:||......|...|.|..|  
Human  2701 ------------HTVDDIQQIAAALAQCMGPSRELVCRSCLKQTLHKLEAMMLILQAETTAGTVT 2753

  Fly  1000 -----KDIQVKTIDHIHV--------------------------IKLSTKLLYELQRR--LNHSS 1031
                 ..|...|.|.||:                          ..|::.|:..|.|.  ||...
Human  2754 PTAIGDSILNITGDLIHLASSDVRAPQPSELGAESPSRMVASQAYNLTSALMRILMRSRVLNEEP 2818

  Fly  1032 ILL---QIISQQNFHN-----IYWWYPDP-----FPSKTSVLIVHAYSPVQ--FFRSAKEFQLTN 1081
            :.|   :|::|....:     .|...|.|     .|...|..:.:....||  |...:..|    
Human  2819 LTLAGEEIVAQGKRSDPRSLLCYGGAPGPGCHFSIPEAFSGALANLSDVVQLIFLVDSNPF---- 2879

  Fly  1082 PLVYKTNITHFNDASFNQYMTNNSIQNSTEVHIYSVMLNHKAMLAVRIVNCSELMYIKMRLHRWP 1146
            |..|.:|.|.....:...:.|....|...|      .|..:..:.|::.|.|:          |.
Human  2880 PFGYISNYTVSTKVASMAFQTQAGAQIPIE------RLASERAITVKVPNNSD----------WA 2928

  Fly  1147 TLGQIRQ----HACRITPDMQ-GKRIWIANS--------------------CERSPAYVAIHKPG 1186
            ..|....    ::..:.|... |..:.:.:|                    .|....|:|::...
Human  2929 ARGHRSSANSANSVVVQPQASVGAVVTLDSSNPAAGLHLQLNYTLLDGHYLSEEPEPYLAVYLHS 2993

  Fly  1187 EIRYKTEDKDQLSARGRKKGNRTHDGSETPEVRQKAD------FIDYDNEDIVEEVLP------- 1238
            |.|   .::...||..|.:          ||..|.||      ||...:.|      |       
Human  2994 EPR---PNEHNCSASRRIR----------PESLQGADHRPYTFFISPGSRD------PAGSYHLN 3039

  Fly  1239 ---------LNYSILLEIYQCN-------IWKNRSLDPGWSEDHCTTSFEHSRGSSVQCTCHTLG 1287
                     |..|:.|....|.       :|:...|.|          .|.:......|....|.
Human  3040 LSSHFRWSALQVSVGLYTSLCQYFSEEDMVWRTEGLLP----------LEETSPRQAVCLTRHLT 3094

  Fly  1288 ALSSRIF-PISSQLFVEHIPVPIFTFNMILMIFFAL-LFLLLVFKFLLHLNIISAYLKNPEFRL- 1349
            |..:.:| |.|...||  .|.|....|.|:|:..|: |...:|...:||             :| 
Human  3095 AFGASLFVPPSHVRFV--FPEPTADVNYIVMLTCAVCLVTYMVMAAILH-------------KLD 3144

  Fly  1350 QCDASVGKS----DQSFVSGSEILLVIVTGGQEFAGTTSNVKFYLKSPHRQQTSYQITQDPGHPK 1410
            |.|||.|::    .|......|||  :.||....:|||::|...|         |.:....||..
Human  3145 QLDASRGRAIPFCGQRGRFKYEIL--VKTGWGRGSGTTAHVGIML---------YGVDSRSGHRH 3198

  Fly  1411 L------LRNS--TIKIMVPR--GHIYIPTRLALRLVPNGRYPSWYCRSITVVDLKLKVQQLFLV 1465
            |      .|||  ..:|..|.  |.::   ::.:.....|..|:|:.:.:.|.||:......|||
Human  3199 LDGDRAFHRNSLDIFRIATPHSLGSVW---KIRVWHDNKGLSPAWFLQHVIVRDLQTARSAFFLV 3260

  Fly  1466 ESWI------EGG---------SHIQFMRSKYFTYGNYSR--YPKYTW 1496
            ..|:      .||         |....:|.:........|  :.|:.|
Human  3261 NDWLSVETEANGGLVEKEVLAASDAALLRFRRLLVAELQRGFFDKHIW 3308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42685NP_609717.5 REJ 411..>728 CDD:366875 71/351 (20%)
PLAT 1367..1480 CDD:238061 33/137 (24%)
PKD1XP_047290164.1 PPP1R42 <54..127 CDD:455733
leucine-rich repeat 70..92 CDD:275378
leucine-rich repeat 93..116 CDD:275378
PCC 97..2773 CDD:188093 152/798 (19%)
leucine-rich repeat 117..129 CDD:275378
GPS 3056..3105 CDD:470616 10/58 (17%)
PLAT_polycystin 3163..3282 CDD:238850 32/132 (24%)
Polycystin_dom 3758..3936 CDD:466668
PKD_channel 3937..4158 CDD:462341
Blue background indicates that the domain is not in the aligned region.

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