Sequence 1: | NP_609717.5 | Gene: | CG42685 / 34854 | FlyBaseID: | FBgn0261571 | Length: | 1609 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001244281.1 | Gene: | Pkd1 / 24650 | RGDID: | 3333 | Length: | 4292 | Species: | Rattus norvegicus |
Alignment Length: | 1991 | Identity: | 338/1991 - (16%) |
---|---|---|---|
Similarity: | 600/1991 - (30%) | Gaps: | 683/1991 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFLYFMTISMSLVLIMENSGTPL---------MSLLDGTFLEAYNRSTESPEGGPTSHPWRSAEA 56
Fly 57 GKISFSERTRFTKMLSRKRHKIIRRTIPEEEERRIERLWDPVLNKSYDF--------SSFEEYNT 113
Fly 114 TTKTYPTIPSEKFGLEDAARTY---KNISEQKPGENSTHLFNDEDYSWSSVNTEISYGYENQTYE 175
Fly 176 NGIE---------------------------GSKSQNGNVS------------------------ 189
Fly 190 FSL------------ADFPLVDEYPIYN----QSSTCI-------------NNSSTEYQNQT--- 222
Fly 223 ----------------VNDYNFAVP---------------------------CLAPNVNGRTSSV 244
Fly 245 KNQQLLGQKGPLKVYL-FMNRNPVYGEEYSVF-----TTMP--------------SLGKKNFAVN 289
Fly 290 LTVDTNDYLIDEIHSDWKYTKNLRKLMRKWGIRSKRIVYNRCYFHRCTARF------------YN 342
Fly 343 ----------------TKHKYIVAKVSSLNDRRKLLAHVVRFKIKVRKPPNVSCLPA-----LEL 386
Fly 387 EFCKNPEKPVYF--------SPMGHLEFFASISDACS-TVEYDKITWQLCDITENKIIARLKNAT 442
Fly 443 GLVVKLLPYKVHILNEPDRRKVFLLRGKAVINGVTTVAR--------CY---MKYKPPPIE---- 492
Fly 493 -----------PLIKGNERRLVDVRKPIIIDGSSSKDRLKIRESIKSK-QFLWTCISLDDPFNNY 545
Fly 546 CKKYMSK--SPTLRLPPYALKENAVYDFSLTVISRFDPRNRMTTTQTI---KGVAKTTFTPQILC 605
Fly 606 RRNCALGVYAPLDS--IHLISKCDDCPGTVKRYEW--------WLLDTESQPTLESSHKYLI--- 657
Fly 658 --LHTLEPLVQIRLRVWVKGQGWADAFYTLRRNNGPQHGSCTIYPFLGVEGF-TMFEIDCPGF-- 717
Fly 718 -ESPFPPITY---------RYMVSYGVVASNVPYSRIVLTLPAAETIMISICDAIDMCVEKRVEV 772
Fly 773 KVLSIDKSMLTGQKE---------------VMNYVPNFFKRGHWNRAYIMGIAAITFIETSIDGD 822
Fly 823 EFYS------------------YLTGLVASTGSQMEQITTLSSHMLIRLHPVDFRGATVMAEMFS 869
Fly 870 HLGDSFSAIVQEHEWLHREGYYSLTAMHMFFMSILGKKTESHSNAMCSLHNPACMNLQIIDLEKP 934
Fly 935 FVIKF---DPLILVRINSWLMSTWFLYRCIYFLGVIATQRHHPYDDALTIHKSGIAYQINVTEVT 996
Fly 997 ENTKDIQVKTIDHIHVIKLSTKLLYELQRRLNHSSILLQIISQQNFHNIYW--WYPDPFPSKTSV 1059
Fly 1060 LIVHAYSPVQFFRSAKEFQLTNPLVYKTNITHFNDASFNQYMTNNSI-----QNSTEVHIYSVML 1119
Fly 1120 NHKAMLAVRIVNCSELMYIKMRLHRWPTLGQIRQHA----------------CRITPDMQGKRIW 1168
Fly 1169 IANSCERSPAYVAIH-----KPGEIRYKTEDKDQLSARGRKKGNRTHDGSETPEVRQKADFIDYD 1228
Fly 1229 ----------------------NEDIVEEVLPLNYSILLEIY--QCNIWKNRSLDPGWSEDHCTT 1269
Fly 1270 SFEHSRGSSVQCTCHTLGALSSRIF-PISSQLFVEHIPVPIFTFNMILMIFFALLFLLLVFKFLL 1333
Fly 1334 HLNIISAYLKNPEFRLQCDASVGKSDQSFVSGSEIL------------LVIVTGGQEFAGTTSNV 1386
Fly 1387 KFYL-----KSPHRQQTSYQITQDPGHPKLLRNS--TIKIMVPR--GHIYIPTRLALRLVPNGRY 1442
Fly 1443 PSWYCRSITVVDLKLKVQQLFLVESWI------EGG------------SHIQFMR---------- 1479
Fly 1480 -SKYFTYGNYSRYPKYTWCKRFRSRAEQ---------LYFS----WYLINAITGPSQSKVGGIIM 1530
Fly 1531 NQFERTCVWICKTAIT----LAFVTLY-FGKHTVSSIQEET 1566 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42685 | NP_609717.5 | REJ | 411..753 | CDD:307914 | 77/402 (19%) |
PLAT | 1367..1480 | CDD:238061 | 33/162 (20%) | ||
Pkd1 | NP_001244281.1 | LRRNT | 32..71 | CDD:214470 | |
LRR_8 | 61..127 | CDD:290566 | |||
leucine-rich repeat | 70..92 | CDD:275378 | |||
LRR_4 | 72..108 | CDD:289563 | |||
leucine-rich repeat | 93..116 | CDD:275378 | |||
PCC | 97..2722 | CDD:188093 | 207/1227 (17%) | ||
leucine-rich repeat | 117..129 | CDD:275378 | |||
LRRCT | 125..177 | CDD:214507 | |||
WSC | 177..271 | CDD:214616 | |||
PKD | 277..344 | CDD:279180 | |||
CLECT | 406..530 | CDD:214480 | |||
PKD | 927..1007 | CDD:214510 | |||
PKD | 1017..1115 | CDD:214510 | |||
PKD | 1124..1195 | CDD:279180 | |||
PKD | 1214..1278 | CDD:279180 | |||
PKD | 1289..1370 | CDD:214510 | |||
PKD | 1378..1449 | CDD:279180 | |||
PKD | 1471..1538 | CDD:214510 | |||
PKD | 1546..1615 | CDD:279180 | |||
PKD | 1635..1703 | CDD:279180 | 19/88 (22%) | ||
PKD | 1718..1787 | CDD:279180 | 13/68 (19%) | ||
PKD | 1807..1871 | CDD:279180 | 6/63 (10%) | ||
PKD | 1886..1955 | CDD:279180 | 7/68 (10%) | ||
PKD | 1974..2045 | CDD:279180 | 14/76 (18%) | ||
PKD | 2062..2129 | CDD:279180 | 14/82 (17%) | ||
GPS | 3002..3051 | CDD:197639 | 11/58 (19%) | ||
PLAT_polycystin | 3109..3228 | CDD:238850 | 30/129 (23%) | ||
PKD_channel | 3700..4102 | CDD:285288 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 54 | 1.000 | Domainoid score | I10909 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1276906at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |