DRSC/TRiP Functional Genomics Resources

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Protein Alignment osp and triobpb

DIOPT Version :9

Sequence 1:NP_001162975.1 Gene:osp / 34850 FlyBaseID:FBgn0003016 Length:1566 Species:Drosophila melanogaster
Sequence 2:NP_001314738.1 Gene:triobpb / 790927 ZFINID:ZDB-GENE-061215-80 Length:532 Species:Danio rerio


Alignment Length:743 Identity:152/743 - (20%)
Similarity:260/743 - (34%) Gaps:249/743 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   506 LNAKKGWLMKQDNRTCEWSKHWFTLSGAALFYYRDPLCEERGVLDGVLDVNSLTSVIPEPAASKQ 570
            ||.||||:.|.| .:.||.||||.|:.|.|.||||...|||..:||.:|:.:...| .|....|.
Zfish     6 LNFKKGWMSKLD-ESGEWRKHWFVLTDAGLKYYRDSAAEERDDVDGEIDLKACVKV-SEFEVEKN 68

  Fly   571 HAFQLTTWDKQRLVLASLSPSSRNSWLAVLRSAAGLPQLDTPPKQTDIEQDFIKAQLQQPSSSPV 635
            :.||:.|.|.. ..|::::...|.:|:.:|:...      .|....|:      .||...||...
Zfish    69 YGFQIQTRDAV-FTLSAMTAGIRRNWIEILKKNV------RPGSSPDL------TQLANCSSDKE 120

  Fly   636 TPGTPAGPHFSSDEEYRTASEGGRRDSLDWG--SPLSPSPPVLRSCLRNRSLASL--HKRSRSSP 696
            ....|:.....|..|..:|......:..|:.  ||::..|..|.:..|......:  |.:.:.:.
Zfish   121 NTRHPSSLRLRSQSEASSAIINSAHNKFDYVELSPIATPPTPLSTNQRESGEGQVKEHSQWQETR 185

  Fly   697 PS-----------SRRSTVDSVASDELPLLVVPEEMQPTESRELKQQCETLRAE---ASLREARM 747
            ||           ||:.|                 .|.:|.:.::::.|...||   ..|:|.|.
Zfish   186 PSDDAHNQWEAVLSRKGT-----------------SQLSEQKRIEEEIERKWAEFERLPLKETRS 233

  Fly   748 SELLATLQRTEQQLTARLQEQQQQLNSELTQAKQSASDLMHNLGMQL--TESQCQ--IKQLEDRL 808
            ...:.:..:..::..|.|::|..:|.:...|.::.:     ..|.|.  .||:|.  ::|:|.|.
Zfish   234 HPAMRSSNQALEREVASLRQQLAELGAGQGQGREGS-----GAGHQCCGAESRCSDVLQQMERRH 293

  Fly   809 AQGIEENEGLYKRLRELQAQDHSGGAALSNLQRH--KIKRMDSLSDLTTISDIDPYCLQRDSLAE 871
            ...:||.|                       |||  :|..:::               |||:|.:
Zfish   294 RAVMEEQE-----------------------QRHAQQISALEA---------------QRDTLLQ 320

  Fly   872 EYNELRSRFEKAVNEIRAMKRELKQSQNQYDALELAQAALQQKLERRQHEDGAQLQLMAARIQDL 936
            |.....:...:|:.  :|.:.||:    :...|:..:|.....|.::|.::...|:         
Zfish   321 EEAHATATVMEALQ--KAHREELE----KITQLKQTRALDSHTLNKQQQDEVCSLR--------- 370

  Fly   937 TLKYSSSERQVRALKQKLAKS--ERRRSLSLKGKEQLELKLSELQRETVERKEGTPPESSSSESS 999
                    |:::||.::.::.  |.:|:..|:.....:::|.:.|.|.:.|.:            
Zfish   371 --------RELQALSERYSQQCVELKRAQQLRDDSDTQIRLMDTQMEQLRRDK------------ 415

  Fly  1000 SQSPLNAHLLQRLHSLEHVLLGSKERLEQSLTQLQQIRAGQRTRRSVSPMNDRKDGLRQLERALA 1064
                      |.|.:          ||...:..::.:..||.:.                    |
Zfish   416 ----------QDLQA----------RLTDEMKLIRSLATGQGSS--------------------A 440

  Fly  1065 ETCVMVSEQMELTCLQDSCHK-CCDLRQRVEKLSALQQQTETDLQRSEQLLEQRETDLAQALEKC 1128
            ||              |..|: ||::                     :.||..||.:|       
Zfish   441 ET--------------DDTHRSCCEM---------------------QVLLRVRENEL------- 463

  Fly  1129 ASQEQEQELLLQQRQELSEELGRQQERCRRLEKRLELLEREHGKQLECLREVYHTEHANAADEQS 1193
                          |.|..||       ..|..:|..|..|  |...|.|      ::...:|.|
Zfish   464 --------------QYLHREL-------NSLRNQLHFLTTE--KSSVCAR------YSEVCEELS 499

  Fly  1194 FRK-RYQTEIEQLRTLCEKGLSAMETSH 1220
            ..| |.:.|.|.||......|:|:...|
Zfish   500 VMKSRSERETETLREHLRLALNALSEGH 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ospNP_001162975.1 PH_RIP 48..191 CDD:269942
PH 85..185 CDD:278594
PH_M-RIP 509..613 CDD:270094 36/103 (35%)
PH 509..603 CDD:278594 36/93 (39%)
SbcC 726..1353 CDD:223496 90/508 (18%)
triobpbNP_001314738.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577696
Domainoid 1 1.000 69 1.000 Domainoid score I9570
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 175 1.000 Inparanoid score I4051
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002350
OrthoInspector 1 1.000 - - otm25629
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR17271
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.080

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