DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and UBC35

DIOPT Version :10

Sequence 1:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_565192.1 Gene:UBC35 / 844224 AraportID:AT1G78870 Length:153 Species:Arabidopsis thaliana


Alignment Length:145 Identity:106/145 - (73%)
Similarity:123/145 - (84%) Gaps:0/145 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LTPRIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAPK 68
            |..||||||||||.:|.|||||:|.|.|.|||:|::.||..||:|||.|||||||||:|||.|||
plant     6 LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPK 70

  Fly    69 VRFLTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNE 133
            |||||||:|||||::||||||||||||||||||||||||||||||||||||||:.::|:.||.||
plant    71 VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNE 135

  Fly   134 RRAIQLARECTLKHA 148
            ..|:..|:|.|..:|
plant   136 AEAVDTAKEWTRLYA 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 105/142 (74%)
UBC35NP_565192.1 UBCc_UBE2N 6..149 CDD:467433 105/142 (74%)

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