DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and UBC11

DIOPT Version :10

Sequence 1:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_566331.1 Gene:UBC11 / 820016 AraportID:AT3G08690 Length:148 Species:Arabidopsis thaliana


Alignment Length:143 Identity:68/143 - (47%)
Similarity:93/143 - (65%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAPKVRF 71
            ||:||.:.|.:||....||.|...:..::...:.||.:||:.||.|.:.:..|.|||.|.|||.|
plant     5 RILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSF 69

  Fly    72 LTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNERRA 136
            .||::||||:..|.|||||||::|||||.|..|||||.:||:.|||||||..::|.::|.:..:.
plant    70 KTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKY 134

  Fly   137 IQLARECTLKHAM 149
            ...||..|.|:||
plant   135 ESTARSWTQKYAM 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 65/139 (47%)
UBC11NP_566331.1 UBCc_UBE2D 3..145 CDD:467412 65/139 (47%)

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