DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and Ube2d3

DIOPT Version :10

Sequence 1:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_006233397.1 Gene:Ube2d3 / 81920 RGDID:619912 Length:148 Species:Rattus norvegicus


Alignment Length:143 Identity:71/143 - (49%)
Similarity:92/143 - (64%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAPKVRF 71
            ||.||...|..||....||.|...:..::...:.||.|||::||.|.|.:..|.|||.|.|||.|
  Rat     5 RINKELSDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAF 69

  Fly    72 LTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNERRA 136
            .|:|:||||:..|.||||||:.:|||||.|..|||||.:||..|||||||..::|.::|.:..:.
  Rat    70 TTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKY 134

  Fly   137 IQLARECTLKHAM 149
            .:||||.|.|:||
  Rat   135 NRLAREWTEKYAM 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 68/139 (49%)
Ube2d3XP_006233397.1 UBCc_UBE2D 3..145 CDD:467412 68/139 (49%)

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