DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and UBC2

DIOPT Version :10

Sequence 1:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_565289.1 Gene:UBC2 / 814805 AraportID:AT2G02760 Length:152 Species:Arabidopsis thaliana


Alignment Length:141 Identity:60/141 - (42%)
Similarity:92/141 - (65%) Gaps:3/141 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TP---RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKA 66
            ||   |::::.:||.:||..|||..|.:.|...::.::.||.|:|::||.|||.|...||||.|.
plant     3 TPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKP 67

  Fly    67 PKVRFLTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKV 131
            |.|||::::|||||...|.||||||:::|||...:..:|.|||:||..|||:.|..::.|.::..
plant    68 PTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSE 132

  Fly   132 NERRAIQLARE 142
            ::|...:..||
plant   133 SKREYNRRVRE 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 60/141 (43%)
UBC2NP_565289.1 UBCc_UBE2A_2B 3..145 CDD:467410 60/141 (43%)

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