DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and ube2a

DIOPT Version :10

Sequence 1:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_958430.1 Gene:ube2a / 797853 ZFINID:ZDB-GENE-030616-72 Length:152 Species:Danio rerio


Alignment Length:150 Identity:64/150 - (42%)
Similarity:96/150 - (64%) Gaps:11/150 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TP---RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKA 66
            ||   |::::.:||.|||..|:|..|.|.|...::.::.||:.:|||.|.|||.:...|:||.|.
Zfish     3 TPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKP 67

  Fly    67 PKVRFLTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKV 131
            |.|||::|:||||:...|.||||||:::|||...:.::|.|||:||..|||:.|..:..|:|::.
Zfish    68 PTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQE 132

  Fly   132 NERR------AI--QLAREC 143
            |:|.      ||  |..|:|
Zfish   133 NKREYEKRVSAIVEQSWRDC 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 63/149 (42%)
ube2aNP_958430.1 UBCc_UBE2A_2B 3..145 CDD:467410 60/141 (43%)

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