DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3473 and UBE2B

DIOPT Version :10

Sequence 1:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_003328.1 Gene:UBE2B / 7320 HGNCID:12473 Length:152 Species:Homo sapiens


Alignment Length:133 Identity:60/133 - (45%)
Similarity:90/133 - (67%) Gaps:3/133 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TP---RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKA 66
            ||   |::::.:||.|||..|:|..|.|.|...::.::.||:.:|||.|.|||.:...|:||.|.
Human     3 TPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKP 67

  Fly    67 PKVRFLTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKV 131
            |.||||:|:||||:...|.||||||:::|||...:.::|.|||:||..|||:.|..:..|:|::.
Human    68 PTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQE 132

  Fly   132 NER 134
            |:|
Human   133 NKR 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 60/133 (45%)
UBE2BNP_003328.1 UBCc_UBE2A_2B 3..145 CDD:467410 60/133 (45%)

Return to query results.
Submit another query.