DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and ube2d3

DIOPT Version :10

Sequence 1:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001016064.1 Gene:ube2d3 / 548818 XenbaseID:XB-GENE-972278 Length:147 Species:Xenopus tropicalis


Alignment Length:143 Identity:70/143 - (48%)
Similarity:92/143 - (64%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAPKVRF 71
            ||.||...|..||....||.|...:..::...:.||.|||::||.|.|.:..|.|||.|.|||.|
 Frog     5 RIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAF 69

  Fly    72 LTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNERRA 136
            .|:|:||||:..|.||||||:.:|||||.|..|||||.:||..|||||||..::|.::|.:..:.
 Frog    70 TTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKY 134

  Fly   137 IQLARECTLKHAM 149
            .::|||.|.|:||
 Frog   135 NRIAREWTQKYAM 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 67/139 (48%)
ube2d3NP_001016064.1 UBCc_UBE2D 3..145 CDD:467412 67/139 (48%)

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