DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and ube2b

DIOPT Version :9

Sequence 1:NP_001285937.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001005124.1 Gene:ube2b / 448706 XenbaseID:XB-GENE-1003709 Length:152 Species:Xenopus tropicalis


Alignment Length:133 Identity:59/133 - (44%)
Similarity:90/133 - (67%) Gaps:3/133 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TP---RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKA 66
            ||   |::::.:||.|||..|:|..|.|.|...::.::.||:.:|||.|.|||.:...|:||.|.
 Frog     3 TPARRRLMRDFKRLQEDPPVGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKP 67

  Fly    67 PKVRFLTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKV 131
            |.|||::|:||||:...|.||||||:::|||...:.::|.|||:||..|||:.|..:..|:|::.
 Frog    68 PTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQE 132

  Fly   132 NER 134
            |:|
 Frog   133 NKR 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_001285937.1 UBCc 3..151 CDD:294101 59/133 (44%)
COG5078 7..149 CDD:227410 57/128 (45%)
ube2bNP_001005124.1 UQ_con 8..145 CDD:395127 57/128 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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