DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3473 and Ubc7

DIOPT Version :9

Sequence 1:NP_001285937.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001285334.1 Gene:Ubc7 / 44054 FlyBaseID:FBgn0267384 Length:167 Species:Drosophila melanogaster


Alignment Length:154 Identity:52/154 - (33%)
Similarity:78/154 - (50%) Gaps:14/154 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RIIKETQRLLEDPVPGISATP-DECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAPKVR 70
            |::.|.::|..||..||.|.| .|.|...:..|:.||:.:.||||.|...|..|.|||:..||::
  Fly     8 RLMAEYKQLTLDPPEGIVAGPISEDNFFEWEALIAGPEGTCFEGGVFPARLIFPTDYPLSPPKMK 72

  Fly    71 FLTKIFHPNIDRVGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLA 122
            |...:|||||...||:|:.||             .::|||...:..:|||:.::|:.||.:....
  Fly    73 FTCDMFHPNIFADGRVCISILHAPGDDPMGYELSAERWSPVQSVEKILLSVVSMLAEPNDESGAN 137

  Fly   123 NDVAELWKVNERRAIQLARECTLK 146
            .|.|.:|:........:||....|
  Fly   138 VDAAIMWREQRDEFNAIARRLVRK 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_001285937.1 UBCc 3..151 CDD:294101 52/154 (34%)
COG5078 7..149 CDD:227410 52/154 (34%)
Ubc7NP_001285334.1 COG5078 1..163 CDD:227410 52/154 (34%)
UQ_con 8..159 CDD:278603 51/150 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438110
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.