DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and ube2b

DIOPT Version :10

Sequence 1:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001002747.1 Gene:ube2b / 437020 ZFINID:ZDB-GENE-040718-247 Length:152 Species:Danio rerio


Alignment Length:128 Identity:57/128 - (44%)
Similarity:87/128 - (67%) Gaps:0/128 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAPKVRF 71
            |::::.:||.|||..|:|..|.|.|...::.::.||..:|||.|.|||.:...|:||.|.|.|||
Zfish     8 RLMRDFKRLQEDPPTGVSGAPSENNIMLWNAVIFGPVGTPFEDGTFKLVIEFSEEYPNKPPTVRF 72

  Fly    72 LTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNER 134
            ::|:||||:...|.||||||:::|||...:.::|.|||:||..|||:.|..:..|:|::.|:|
Zfish    73 VSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKR 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 57/128 (45%)
ube2bNP_001002747.1 UBCc_UBE2A_2B 3..145 CDD:467410 57/128 (45%)

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