DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and Ubc87F

DIOPT Version :9

Sequence 1:NP_001285937.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_650309.1 Gene:Ubc87F / 41682 FlyBaseID:FBgn0267383 Length:168 Species:Drosophila melanogaster


Alignment Length:157 Identity:54/157 - (34%)
Similarity:90/157 - (57%) Gaps:23/157 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LTPRIIKETQRLLEDPVPGISA-TPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAP 67
            |..|.:.|.||   .||.|.|| ...:.:...:.|::.||.|:.:|||.||..|..|::||::.|
  Fly     9 LLNRQLSELQR---HPVEGFSAGLVSDSDIFKWEVVIIGPPDTLYEGGFFKAHLIFPKEYPLRPP 70

  Fly    68 KVRFLTKIFHPNIDRVGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAPNPDD 119
            |::|:|:|:|||||:.|.:|:.||             :::|.|...:.|:|||:.::|:.|| |:
  Fly    71 KMKFITEIWHPNIDKAGDVCISILHEPGDDKWGYEKAEERWLPVHTVETILLSVISMLTDPN-DE 134

  Fly   120 PLAN-DVAELWKVN----ERRAIQLAR 141
            ..|| |.|:.::.|    :|:..:..|
  Fly   135 SAANVDAAKEYRENYAEFKRKVTRCVR 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_001285937.1 UBCc 3..151 CDD:294101 54/157 (34%)
COG5078 7..149 CDD:227410 53/154 (34%)
Ubc87FNP_650309.1 COG5078 1..163 CDD:227410 54/157 (34%)
UQ_con 10..160 CDD:278603 52/153 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438078
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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