DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and CG17030

DIOPT Version :9

Sequence 1:NP_001285937.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_647941.1 Gene:CG17030 / 38591 FlyBaseID:FBgn0035584 Length:180 Species:Drosophila melanogaster


Alignment Length:154 Identity:40/154 - (25%)
Similarity:80/154 - (51%) Gaps:22/154 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RIIKETQRLLEDPVPGISATPDECNARYFHVLV--------TG---PKDSPFEGGNFKLELFLPE 60
            |:.:|...:||          |:.|.::.::||        ||   |...|::.|.:|:|:..|.
  Fly    14 RMNRELALMLE----------DKQNLQFRNLLVEPNNIYKWTGLLMPVAPPYDKGAYKMEIDFPL 68

  Fly    61 DYPMKAPKVRFLTKIFHPNIDRVGRICLDILK-DKWSPALQIRTVLLSIQALLSAPNPDDPLAND 124
            |||.|.|::...|:::|.|::..|::|:.||: :.|.|..:|..||..:.|.::.|.|::....:
  Fly    69 DYPFKPPRIHINTRMYHLNVNERGQVCVPILEVEHWIPTTRIDQVLQVLLATINDPQPENAWHIE 133

  Fly   125 VAELWKVNERRAIQLARECTLKHA 148
            :|..::.:..|..::|.....|::
  Fly   134 MAGEYRNDPVRFFKMADAWVQKYS 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_001285937.1 UBCc 3..151 CDD:294101 40/154 (26%)
COG5078 7..149 CDD:227410 40/154 (26%)
CG17030NP_647941.1 COG5078 12..158 CDD:227410 40/154 (26%)
UQ_con 14..153 CDD:278603 39/148 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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