DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and CG16894

DIOPT Version :9

Sequence 1:NP_001285937.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_611455.1 Gene:CG16894 / 37280 FlyBaseID:FBgn0034483 Length:266 Species:Drosophila melanogaster


Alignment Length:112 Identity:31/112 - (27%)
Similarity:51/112 - (45%) Gaps:19/112 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLEDPVPGISATPD-ECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYP--MKAPKVRFLTKIF 76
            |:::.:..|.|.|. .|...:|.|:..  ....:.|..|:..:.|||::|  :..|.|.|.|::.
  Fly    26 LVKEELKNIYAIPSYACGLHWFGVIFV--HSGIYAGSVFRFSILLPENFPADISLPTVVFSTEVL 88

  Fly    77 HPNIDRVGRIC-----LDI--LKDKW-SPALQIRTVLLSIQALLSAP 115
            ||:      ||     ||:  ..::| .....|..||..|||:.:.|
  Fly    89 HPH------ICPQNKTLDLAHFLNEWRKDEHHIWHVLRYIQAIFADP 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_001285937.1 UBCc 3..151 CDD:294101 31/112 (28%)
COG5078 7..149 CDD:227410 31/112 (28%)
CG16894NP_611455.1 COG5078 20..176 CDD:227410 31/112 (28%)
UBCc 23..173 CDD:294101 31/112 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438114
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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