DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and Ube2t

DIOPT Version :10

Sequence 1:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001101814.2 Gene:Ube2t / 360847 RGDID:1310816 Length:204 Species:Rattus norvegicus


Alignment Length:148 Identity:65/148 - (43%)
Similarity:91/148 - (61%) Gaps:4/148 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAPKVRF 71
            |:.||...|..:|.||::...::.........:.|..::|:|.|.|.||:.:||.||.:.|::||
  Rat     6 RLKKELHMLAIEPPPGVTCWQEKDKMDNLRAQILGGANTPYEKGIFTLEVIVPERYPFEPPQIRF 70

  Fly    72 LTKIFHPNIDRVGRICLDIL----KDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVN 132
            ||.|:|||||..||||||||    |..|.|:|.|.|||.|||.|::.|||||||..|::..:|.|
  Rat    71 LTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYN 135

  Fly   133 ERRAIQLARECTLKHAMQ 150
            :...::.||:.|..||.|
  Rat   136 KIAFVKKARQWTETHARQ 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 62/143 (43%)
Ube2tNP_001101814.2 UBCc_UBE2T 5..150 CDD:467425 62/143 (43%)

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