DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and Ube2a

DIOPT Version :9

Sequence 1:NP_001285937.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001013955.1 Gene:Ube2a / 298317 RGDID:1359534 Length:162 Species:Rattus norvegicus


Alignment Length:160 Identity:64/160 - (40%)
Similarity:96/160 - (60%) Gaps:21/160 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TP---RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEG----------GNFKLEL 56
            ||   |::::.:||.|||..|:|..|.|.|...::.::.||:.:|||.          |.|||.:
  Rat     3 TPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTHVETTGQLGTFKLTI 67

  Fly    57 FLPEDYPMKAPKVRFLTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
            ...|:||.|.|.|||::|:||||:...|.||||||:::|||...:.::|.|||:||..|||:.|.
  Rat    68 EFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPA 132

  Fly   122 ANDVAELWKVNERR------AI--QLAREC 143
            .:..|:|::.|:|.      ||  |..|:|
  Rat   133 NSQAAQLYQENKREYEKRVSAIVEQSWRDC 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_001285937.1 UBCc 3..151 CDD:294101 64/160 (40%)
COG5078 7..149 CDD:227410 62/155 (40%)
Ube2aNP_001013955.1 UQ_con 8..155 CDD:395127 58/146 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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