DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and Ube2d1

DIOPT Version :10

Sequence 1:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001408209.1 Gene:Ube2d1 / 216080 MGIID:2384911 Length:186 Species:Mus musculus


Alignment Length:145 Identity:68/145 - (46%)
Similarity:92/145 - (63%) Gaps:0/145 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TPRIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAPKV 69
            |.|..:|...|..||....||.|...:..::...:.||.||.::||.|.|.:..|.|||.|.||:
Mouse    42 TDRPAQELSDLQRDPPAHCSAGPVGDDLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKI 106

  Fly    70 RFLTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNER 134
            .|.|||:||||:..|.||||||:.:|||||.:..|||||.:||..|||||||..|:|:::|.::.
Mouse   107 AFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKE 171

  Fly   135 RAIQLARECTLKHAM 149
            :..:.|||.|.|:||
Mouse   172 KYNRHAREWTQKYAM 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 65/141 (46%)
Ube2d1NP_001408209.1 UBCc_UBE2D 44..184 CDD:467412 64/139 (46%)

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