DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and let-70

DIOPT Version :10

Sequence 1:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_502065.1 Gene:let-70 / 178006 WormBaseID:WBGene00002344 Length:147 Species:Caenorhabditis elegans


Alignment Length:143 Identity:73/143 - (51%)
Similarity:93/143 - (65%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAPKVRF 71
            ||.||.|.|..||....||.|...:..::...:.||.:||::||.|.|.:..|.|||.|.|||.|
 Worm     5 RIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAF 69

  Fly    72 LTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNERRA 136
            .|:|:||||:..|.||||||:.:|||||.|..|||||.:||..|||||||..::|.::|.:..|.
 Worm    70 TTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERY 134

  Fly   137 IQLARECTLKHAM 149
            .|||||.|.|:||
 Worm   135 NQLAREWTQKYAM 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 70/139 (50%)
let-70NP_502065.1 UBCc_UBE2D 3..145 CDD:467412 70/139 (50%)

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