DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and ubc-1

DIOPT Version :9

Sequence 1:NP_001285937.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001379774.1 Gene:ubc-1 / 177170 WormBaseID:WBGene00006701 Length:192 Species:Caenorhabditis elegans


Alignment Length:148 Identity:61/148 - (41%)
Similarity:94/148 - (63%) Gaps:7/148 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TP---RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKA 66
            ||   |::::.::|.|||..|:|..|.|.|...:..::.||:::|||.|.|||.|...|:||.|.
 Worm     3 TPSRRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKP 67

  Fly    67 PKVRFLTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKV 131
            |.|:|::|:||||:...|.||||||:::|||...:..:|.|||:||..|||:.|..:..|:|::.
 Worm    68 PTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQE 132

  Fly   132 N----ERRAIQLARECTL 145
            |    |:|..|:..:..|
 Worm   133 NRREYEKRVQQIVEQSWL 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_001285937.1 UBCc 3..151 CDD:294101 61/148 (41%)
COG5078 7..149 CDD:227410 59/143 (41%)
ubc-1NP_001379774.1 UQ_con 8..145 CDD:395127 58/136 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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