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Protein Alignment CG3473 and ubc-6
DIOPT Version :9
Sequence 1: | NP_001285937.1 |
Gene: | CG3473 / 34849 |
FlyBaseID: | FBgn0028913 |
Length: | 151 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001040755.1 |
Gene: | ubc-6 / 174217 |
WormBaseID: | WBGene00006703 |
Length: | 314 |
Species: | Caenorhabditis elegans |
Alignment Length: | 164 |
Identity: | 49/164 - (29%) |
Similarity: | 65/164 - (39%) |
Gaps: | 38/164 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAPKVRF 71
|::||... |..|.....|.|.|.|...:|..:.|...:.||||.:...:..|.|||||.|.:..
Worm 14 RLMKEAME-LRQPTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLIL 77
Fly 72 LTKIFHPNIDRVGR------ICLDIL---KDKWSPALQIRTVLLSIQALLSA------------P 115
|| || || :||.|. .:.|.|:..|||.||::...|.: |
Worm 78 LT----PN----GRFELNKKVCLSISGYHPETWLPSWSIRTALLALIGFLPSTPGGALGSLDYPP 134
Fly 116 NPDDPLANDVAELWKVNERRAIQLARECTLKHAM 149
.....||....| ||..| ..|.:|.|:
Worm 135 KERQRLAKLSCE-WKCKE-------CGCVMKTAL 160
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG3473 | NP_001285937.1 |
UBCc |
3..151 |
CDD:294101 |
49/164 (30%) |
COG5078 |
7..149 |
CDD:227410 |
48/162 (30%) |
ubc-6 | NP_001040755.1 |
UBCc |
12..>121 |
CDD:238117 |
39/115 (34%) |
rne |
<185..266 |
CDD:236766 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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