DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and C28G1.10

DIOPT Version :9

Sequence 1:NP_001285937.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001257066.1 Gene:C28G1.10 / 13222010 WormBaseID:WBGene00219376 Length:203 Species:Caenorhabditis elegans


Alignment Length:123 Identity:42/123 - (34%)
Similarity:69/123 - (56%) Gaps:3/123 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAPKVRFLTKIFHPNIDRV-GR 85
            ||.....|.|..:...::.|.:::|:|||.|:|::.:.|.||.|||.|:|:|||:||::... |.
 Worm    25 GIRIKVIEGNIMHLKGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGT 89

  Fly    86 ICL-DILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNERRAIQLARE 142
            ||| |:....|..::.|..||:.||:.:|..|..:|:..::.| ...|.|...:...|
 Worm    90 ICLHDVDNGVWPVSMTIYKVLIVIQSWMSNFNEKEPIDVEILE-QATNNREVFEKTAE 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_001285937.1 UBCc 3..151 CDD:294101 42/123 (34%)
COG5078 7..149 CDD:227410 42/123 (34%)
C28G1.10NP_001257066.1 UBCc 5..149 CDD:238117 42/123 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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