DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and Ube2n

DIOPT Version :9

Sequence 1:NP_001285937.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_446380.1 Gene:Ube2n / 116725 RGDID:621096 Length:152 Species:Rattus norvegicus


Alignment Length:151 Identity:119/151 - (78%)
Similarity:132/151 - (87%) Gaps:0/151 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAALTPRIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMK 65
            ||.|..||||||||||.:|||||.|.|||.|||||||::.||:|||||||.|||||||||:|||.
  Rat     1 MAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMA 65

  Fly    66 APKVRFLTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWK 130
            ||||||:|||:|||:|::||||||||||||||||||||||||||||||||||||||||||||.||
  Rat    66 APKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWK 130

  Fly   131 VNERRAIQLARECTLKHAMQN 151
            .||.:||:.||..|..:||.|
  Rat   131 SNEAQAIETARAWTRLYAMNN 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_001285937.1 UBCc 3..151 CDD:294101 116/147 (79%)
COG5078 7..149 CDD:227410 113/141 (80%)
Ube2nNP_446380.1 UBCc 4..151 CDD:412187 116/146 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340421
Domainoid 1 1.000 243 1.000 Domainoid score I2143
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H128406
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53976
OrthoDB 1 1.010 - - D1345547at2759
OrthoFinder 1 1.000 - - FOG0002236
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24068
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1478
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.960

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