DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3473 and Ube2e1

DIOPT Version :10

Sequence 1:NP_609715.1 Gene:CG3473 / 34849 FlyBaseID:FBgn0028913 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_038949665.1 Gene:Ube2e1 / 100366017 RGDID:2324438 Length:310 Species:Rattus norvegicus


Alignment Length:142 Identity:64/142 - (45%)
Similarity:83/142 - (58%) Gaps:0/142 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RIIKETQRLLEDPVPGISATPDECNARYFHVLVTGPKDSPFEGGNFKLELFLPEDYPMKAPKVRF 71
            ||.||...:..||.|..||.|...|...:...:.||..|.:|||.|.|::....:||.|.|||.|
  Rat   168 RIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTF 232

  Fly    72 LTKIFHPNIDRVGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNERRA 136
            .|:|:|.||:..|.||||||||.|||||.|..|||||.:||:..||.|||...:|..:..|....
  Rat   233 RTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEH 297

  Fly   137 IQLARECTLKHA 148
            .::||:.|.::|
  Rat   298 DRMARQWTKRYA 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3473NP_609715.1 UBCc_UBE2N 4..147 CDD:467433 63/139 (45%)
Ube2e1XP_038949665.1 PHA03378 <19..>108 CDD:223065
UBCc_UBE2E 167..307 CDD:467413 63/138 (46%)
Blue background indicates that the domain is not in the aligned region.

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