DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment elB and noc

DIOPT Version :10

Sequence 1:NP_523566.4 Gene:elB / 34844 FlyBaseID:FBgn0004858 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_061512264.1 Gene:noc / 1279646 VectorBaseID:AGAMI1_000439 Length:573 Species:Anopheles gambiae


Alignment Length:648 Identity:214/648 - (33%)
Similarity:287/648 - (44%) Gaps:183/648 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLQSSNHHYLRPDYMTAAAAPTAQLDNKSSPLALLAQTCSAIGADTTN--PKLLAANIEKSTKQL 63
            |||..|:.||:|||:  :..||. ||.|.|||||||||||.||||..|  .|.|.:..||:.|..
Mosquito     9 MLQVGNNQYLQPDYL--SPLPTT-LDAKKSPLALLAQTCSQIGADPGNITVKSLVSPSEKNKKSS 70

  Fly    64 QHHPKGSSGSGGSGSFGLSQQASMDGSARDKSSPVSSHSSSVSTGSVEQQQLPPAHGSSSSSKPT 128
            ..:...:|.:..|||         :.||..:..|.|:.|:|.|. ||:..:       |.:|...
Mosquito    71 SSNSSSTSSTSSSGS---------NSSASSQVDPTSNSSASRSP-SVKTDK-------SDASPEI 118

  Fly   129 PTTFKPYEPN-----NNISNITTAADCGATNLSS-----NNTSAQQRVKTPKSMTNGGGQRCDSN 183
            ...|||||.|     .|:|..::..|..::.:||     ||.|..|               .::|
Mosquito   119 KLAFKPYEMNVLTTKVNLSKSSSLDDRPSSKMSSGSDVLNNNSVSQ---------------INNN 168

  Fly   184 QSASSQHRE----SPTAAGSLRRTPTSGLAGGVM----------QHNGSPGLPPTAST------T 228
            ..:....:|    ||..:.   .:|.||..||..          :|:|:....|.|:.      |
Mosquito   169 NHSDGMRKEGRALSPRGSA---ESPMSGRGGGSASVKSTESNGGEHSGNKCSTPEANRRASSVGT 230

  Fly   229 P---------------GRSNSKESAAMH----SPSAA---------AAAAAAAAQIASSNRLQEA 265
            |               |.|:|..:|.||    .||||         ||...:.:.|..:|.....
Mosquito   231 PSDRDKVSGNSVGGGSGPSSSPSAAMMHPGTMPPSAAYKASPYGMGAAGLPSPSGIDHTNPAFRP 295

  Fly   266 ALAAAKEANYVKALHAASQQGSASAAAAAASYYPPGYGSPYSMDLMTASSLMSPHHAMFKASAMN 330
            ..|.|...::...|.||...|:|:|||||:                              |:..|
Mosquito   296 PFAGAFTHHHAAMLAAAGYSGAAAAAAAAS------------------------------AAGAN 330

  Fly   331 PYLNYARMKGLTEQSMMAATPN-------VCRDPYCTGCPASPHYINKAAGQPCPAGCPQCEGGG 388
            |||:|.|:|          ||:       :|:|||||||..|.|......|..|||||.||:...
Mosquito   331 PYLSYTRVK----------TPSGGETLVPICKDPYCTGCQFSAHNHQMMMGSQCPAGCTQCDHQK 385

  Fly   389 --GGGGGSSKSSGSQG----GSGGSSSAAAAAAAAAASSYHAQLAALAAASQMPYVCSWIGSDAA 447
              .....|...:|..|    .|..:::|||||||||.:|..:|....|.|:..||:|:|:..| :
Mosquito   386 YMAMALSSMPPAGYPGYPPASSAAAAAAAAAAAAAAVNSGGSQPPGSAGAASRPYMCNWVVGD-S 449

  Fly   448 YCGKRFGTSDDLFQHLRTHTASVPDAVLSA------AAAGGIPP---NHPLFQRTYPTPPLSPLS 503
            ||||||.|:|:|..|||||||::.|....|      ..:|..||   :|  ..|.||.|||||||
Mosquito   450 YCGKRFNTTDELLSHLRTHTANLSDPAALALQQQLMPLSGIFPPSSLHH--HHRGYPNPPLSPLS 512

  Fly   504 AARYHPYGKPSMLPPSLAPPGMPGLP-------------PHPALAQYFAPY--SLYGPRMGSS 551
            |||||||.||..:|.:     |||.|             |..|..||::||  :|||.|||::
Mosquito   513 AARYHPYVKPGGIPTA-----MPGSPYSAAAAAAAAAFNPAAAFGQYYSPYAAALYGQRMGAA 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elBNP_523566.4 PRK13914 <111..>188 CDD:237555 18/86 (21%)
zf-C2H2 437..466 CDD:395048 16/28 (57%)
C2H2 Zn finger 439..466 CDD:275368 15/26 (58%)
nocXP_061512264.1 None

Return to query results.
Submit another query.