DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk and Asic1

DIOPT Version :9

Sequence 1:NP_477232.1 Gene:ppk / 34843 FlyBaseID:FBgn0020258 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_006257440.1 Gene:Asic1 / 79123 RGDID:71062 Length:559 Species:Rattus norvegicus


Alignment Length:664 Identity:130/664 - (19%)
Similarity:215/664 - (32%) Gaps:242/664 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EDEEEKKSGISILPGPELLALPGFDTRASIASAALSDVPSDVIIKSRIRYGSPLSACKGLLLEYA 70
            |:|:|.::|..:..|                    .|.|.|                   |:.:|
  Rat    42 EEEKEMEAGSELDEG--------------------DDSPRD-------------------LVAFA 67

  Fly    71 KSTTIHGIRYIFEVHRPIYEKLYWLFFTCISVYFAVSL------IWDTYLKWQESPVILGFDETL 129
            .|.|:||..::|....|...:..|      :|.|.::|      :.|....:...|.:...||  
  Rat    68 NSCTLHGASHVFVEGGPGPRQALW------AVAFVIALGAFLCQVGDRVAYYLSYPHVTLLDE-- 124

  Fly   130 VPVHKIPFPTITICPEIKMERNVFDYTNVSRQLWEEYKQNGNISDLDDEDLARMAVAMHICDSEV 194
            |...::.||.:|.|           .||..|           :|.|...||..:|..:.:.:|: 
  Rat   125 VATTELVFPAVTFC-----------NTNAVR-----------LSQLSYPDLLYLAPMLGLDESD- 166

  Fly   195 VQRFTPLLSQLNPPNVDVTQTLIDLSISKNETGPFCKWNG------RFY--FCDKI--------- 242
             ....||.    ||                  ||.. ::|      |||  .|.::         
  Rat   167 -DPGVPLA----PP------------------GPEA-FSGEPFNLHRFYNRSCHRLEDMLLYCSY 207

  Fly   243 ---------FDFVATDEGICYQFNGLRPKDIYRDEKFISYVDPDVVDFNKYFDVDLPPWNNITGN 298
                     |..|.|..|.||.||                                         
  Rat   208 CGGPCGPHNFSVVFTRYGKCYTFN----------------------------------------- 231

  Fly   299 WSLDTGFVDQGQNAYPQ-RTVFSSVKNGFFAFLQGLQHNF-----DYDCRSFKQGYKVFLNSPES 357
                     .||:..|: :|:.....||....|...|..:     :.|..||:.|.||.::|.:.
  Rat   232 ---------SGQDGRPRLKTMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDE 287

  Fly   358 VPLTTGNYILVPHGDEVLVSVLPAYVVSTDNLHEITPEKRQCLF-------------DDERSLRF 409
            .|..          |::...|.|.:...      ::.::::.::             |.:    |
  Rat   288 PPFI----------DQLGFGVAPGFQTF------VSCQEQRLIYLPSPWGTCNAVTMDSD----F 332

  Fly   410 FRSYSQSNCQTECLANYTVSKCGCAKFWMPKPLGTPVCGLKDI-NCYTSAQDELYTLMQNQTMAK 473
            |.|||.:.|:.:|...|.|..|.|....||.  ..|.|..:.. .|...|.|.|....|..    
  Rat   333 FDSYSITACRIDCETRYLVENCNCRMVHMPG--DAPYCTPEQYKECADPALDFLVEKDQEY---- 391

  Fly   474 SIDESVDITCNCMPACTSLEYNFEISRAKYDVAKTIRAFREEYEHTDA-IGSR---LSVYFKEHQ 534
                     |.|...|....|..|:|..|.....:.:...:::..::. ||..   |.::|:...
  Rat   392 ---------CVCEMPCNLTRYGKELSMVKIPSKASAKYLAKKFNKSEQYIGENILVLDIFFEVLN 447

  Fly   535 FTAIKRTILFGVSTLISNCGGICGLFMGISCLSFLELI-YFFCM---RIC--GSCRDRRKHKIQQ 593
            :..|::...:.::.|:.:.||..|||:|.|.|:.|||. |.:.:   |:|  |.|:...|.....
  Rat   448 YETIEQKKAYEIAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCQKEAKRSSAD 512

  Fly   594 QN-SVDLPEEKSEN 606
            :. ::.|.:.|..|
  Rat   513 KGVALSLDDVKRHN 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppkNP_477232.1 ASC 69..574 CDD:279230 112/561 (20%)
Asic1XP_006257440.1 ASC 63..541 CDD:295594 122/604 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6095
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8907
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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